KEGG   Penaeus monodon (black tiger shrimp): 119596186
Entry
119596186         CDS       T08784                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmoo03041]
    119596186
Spliceosome [BR:pmoo03041]
 Complex B
  Other components
   Complex B specific factors
    119596186
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 LisH_TPL Beta-prop_NWD2_C Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_EIPR1 Mala_s_1-like Beta-prop_BBS7 PROPPIN VPS8_N VPS11_N Beta-prop_IFT122_2nd Beta-prop_LRRK2 LisH_PAC1 DUF7165 WD40_like FlgD_ig
Other DBs
NCBI-GeneID: 119596186
NCBI-ProteinID: XP_037801291
LinkDB
Position
37:8472829..8477870
AA seq 518 aa
MAAASLQFFVPEYSVIRLIQQYLKENNLTRTLRALQEETSITLNTVDSVESFMADINQGH
WDTVLKAIQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRNTDPLIMLKQTVPERYV
HLENLIARSYFDPREAYPEGVTKERRRAAIAAALAGEVSVVPPSRLLALLGQALKWQQHQ
GLLPPGTQIDLFRGKAAMREQEEEKVPTQLARFIRFPQKAHVESAHFSPDGQYLVTGSFD
GIIEVWNFTTGKIRKDLKYQEKDSYMMMESAVLSLAFSRDSEMLSAGSQGGQVKVWRVST
GQCLRKVERAHSEGVTSLAFNKDNSQVLSTSFDNTLRIHGLKSGKTLKEFRGHSSFVNQA
TFTQDGHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSVDLPVFSVHILPKNPDHIVV
CNRSNTVTIMNMQGQTVRSLSSGKREGGDFVSCVVSPRGEWIYCVGEDQVLYCFSTSTGK
LERTLNVHEQSVIGMCHHPHQNLLATFSEEGLLKLWKP
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggctgctgctagtctgcagttttttgtaccagaatatagtgtgatcaggttgatccag
cagtacctaaaggaaaataacctgacacgaacactacgagctcttcaggaggaaacttcc
atcacgcttaacacagtggactctgtggagagcttcatggcagatatcaatcagggtcac
tgggacactgtgctcaaggcaattcagacattgaaactcccagacaagaaactcattgac
ttatatgagcaggttgttctggagctcatagaactgagagagttgggagctgccaagtca
gtgctacgaaatacagatccccttatcatgttgaagcagactgtacctgaaaggtatgtt
catctggagaacctgatagcccgttcatactttgatcctcgagaagcatatcctgaagga
gtaacaaaggagaggaggagggcagccatcgctgcagccctggcaggtgaagtgtcagtc
gtgccgccatctcgtctcttggcccttcttggtcaggccctcaagtggcagcagcatcag
ggtcttctgccacctggtacccagattgatttgttccgaggtaaggcagccatgagggag
caagaggaggagaaagtacccacacagctggcaagatttatccgtttcccacagaaagca
catgtagagagtgcacacttcagtcctgatggacagtaccttgtcactggcagctttgac
ggcattatagaagtatggaatttcaccacaggtaaaattcgtaaggatttaaagtatcaa
gaaaaggattcttacatgatgatggaatctgctgtactgagtttagccttcagcagagat
tctgaaatgctgtctgctgggtctcagggaggacaagttaaggtttggcgtgtcagtaca
ggtcagtgcctgcggaaggtagaacgtgctcactctgaaggtgtgacatctcttgccttc
aacaaagataacagtcaagttttgtccacatcctttgacaacacactcagaatacatggt
ttaaaatctggaaagacactaaaggaatttcgcggtcactcttcatttgtcaaccaagcc
acatttacccaagatggacacaatattatcagtgcatcgtcagatggtactgtcaaagtc
tggtctgtcaaaactacagaatgtatagctacctttaagtcactggctggtgtgacatca
gtggatcttccagtattctctgtccacatcttaccaaagaacccagaccacattgtagtg
tgtaatcgatccaacactgtgactattatgaacatgcaaggccagacagtcaggtcactg
tcctcaggtaagagagagggtggtgactttgtatcatgtgtagtgtcacctcgcggagaa
tggatctattgtgttggtgaggatcaggtgttatattgcttctctacttctacaggcaag
ctagagagaactttgaatgtccatgagcagtctgtgattggtatgtgtcaccatccacat
cagaacttgttggccactttcagtgaagaaggtttactcaagctgtggaagccttga

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