KEGG   Penaeus monodon (black tiger shrimp): 119596187
Entry
119596187         CDS       T08784                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmoo03041]
    119596187
Spliceosome [BR:pmoo03041]
 Complex B
  Other components
   Complex B specific factors
    119596187
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_RIG_2nd LisH_TPL Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EIPR1 Mala_s_1-like PROPPIN Beta-prop_IFT122_2nd VPS8_N Beta-prop_BBS7 LisH_PAC1 DUF7165 FlgD_ig
Other DBs
NCBI-GeneID: 119596187
NCBI-ProteinID: XP_037801292
LinkDB
Position
37:complement(8478178..8486513)
AA seq 549 aa
MCMHMQVVIRLIQQYLKENNLTRTLRALQEETSITLNTVDSVESFMADINQGHWDTVLKA
IQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRKTDPLIMLKQTVPERYVHLENLIP
LSYFDPREAYPKGVTKERRRAAIAAALAGEVSVVPPSRLWPFGRALKGQQHQGLCPAGTQ
IDLFRGKAAMREQEEEKVPTQLARFIRFPQKAHVESAHFSPDGQYLXTGSFDGIIEVWNF
TTGETSVLKIRKDLKYQEKDSYMMMESAVLSLAFSRDSEMLSAGSQGGQVKVWRVSTGQC
LRKVERAHSEGVTSLAFNKDNSQVLSTSFDNTLRIHGLKSGKTLKEFRGHSSFVNQATFT
QDGHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSVDLPVFSVHILPKNPDHIVVCNR
SNTVTIMNMQGQTVRSLSSGKREGGDFVSCVVSPRGEWIYCVGEDQVLYCFSTSTGKLER
TLNVSIPYEFNNFFVYLFLRPCFPFLCLILDSYFCLKLVFAFTLSLFCPKFNYLDKMENN
ILNLAKREM
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgtgcatgcacatgcaagttgtgatcaggttgatccagcagtacctaaaggaaaataac
ctgacacgaacactacgagctcttcaggaggaaacttccatcacgcttaacacagtggac
tctgtggagagcttcatggcagatatcaatcagggtcactgggacactgtgctcaaggca
attcagacattgaaactcccagacaagaaactcattgacttatatgagcaggttgttctg
gagctcatagaactgagagagttgggagctgccaagtcagtgctacgaaaaacagatccc
cttatcatgttgaagcagactgtacctgaaaggtatgttcatctggagaacctgataccc
ctttcatactttgatcctcgagaagcatatcctaaaggagtaacaaaggagaggaggagg
gcagccatcgctgcagccctggcaggtgaagtgtcagtcgtgccgccatctcgtctttgg
ccctttggtcgggccctcaaggggcagcagcatcagggtctttgccctgcaggtacccag
attgatttgttccgaggtaaggcagccatgagggagcaagaggaggagaaagtacccaca
cagctggcaagatttatccgtttcccacagaaagcacatgtagagagtgcacacttcagt
cctgatggacagtacctgntcactggcagctttgacggcattatagaagtatggaatttc
accacaggtgagacctcggttttgaaaattcgtaaggatttaaagtatcaagaaaaggat
tcttacatgatgatggaatctgctgtactgagtttagccttcagcagagattctgaaatg
ctgtctgctgggtctcagggaggacaagttaaggtttggcgtgtcagtacaggtcagtgc
ctgcggaaggtagaacgtgctcactctgaaggtgtgacatctcttgccttcaacaaagat
aacagtcaagttttgtccacatcctttgacaacacactcagaatacatggtttaaaatcc
ggaaagacgctaaaggaatttcgcggtcactcttcatttgtcaaccaagccacatttacc
caagatggacacaatattatcagtgcatcgtcagatggtactgtcaaagtctggtctgtc
aaaactacagaatgtatagctacctttaagtcactggctggtgtgacatcagtggatctt
ccagtattctctgtccacatcttaccaaagaacccagaccacattgtagtgtgtaatcga
tccaacactgtgactattatgaacatgcaaggccagacagtcaggtcactgtcctcaggt
aagagagagggtggtgactttgtatcatgtgtagtgtcacctcgcggagaatggatctat
tgtgttggtgaggatcaggtgttatattgcttctctacttctacaggcaagctagagaga
actttgaatgtaagtattccttatgaatttaacaatttttttgtttatttatttctgaga
ccatgttttccatttctctgtttaatattggatagttatttttgtctaaagcttgttttt
gcatttacattgtctcttttttgcccaaagtttaactacttagataaaatggaaaataat
attttaaatttggcaaaaagagaaatgtaa

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