Penaeus monodon (black tiger shrimp): 119596400
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Entry
119596400 CDS
T08784
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119596400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119596400
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119596400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Nbas_N
Beta-prop_DCAF12
WD_LRWD1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
119596400
NCBI-ProteinID:
XP_037801557
LinkDB
All DBs
Position
37:complement(3579422..3587177)
Genome browser
AA seq
508 aa
AA seq
DB search
MSEGENSPVPLGSGGAPGERRWYGSLEATMGGSESPADSPGSPAAATNIHTSNEYMELDE
PEILDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRNRLKEL
LSRLGEDALKKTVAGTQDAEAPEQEQQRPEETWYHEGPQSLKEARTFILEYSIPRARARL
KKEHLDNEIPEATRTARRQEVQNKLRSFSLLGSQNADSRPISHCSFSPNGKLLATSSWSG
LCKIWKVPDCQEEQKMSGHNCYVDCIEWHPSATLTMEANALNLVSSGRDGTVQLWNLCGE
ALGELPRLEARVSRVVFHPSGRFLGACVHDNSWRLWDLEIQEEVLFQEGHSKPVFCLDFQ
GDGSLAATGGMDAFGRIWDLRSGRCVMFLTGHQNAILGINWSPDGYHLVSGSEDNSARIW
DVRARRCIYSIPAHTGIVTGARYDKIGGQYIVTSSYDGSVRLWCHGSFQPMRALEGHGQK
VMGVDISPSDGIIATCAFDRTFKLWGPD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggtgagaactccccagtgcccctggggagtggaggggcaccaggggagagg
aggtggtatgggtccctggaggccaccatggggggcagtgagtctccggccgactcgcca
ggaagcccagctgcagccaccaacatccacacaagcaatgagtacatggaactcgatgag
ccagaaatcttggacgaaaagaaggctttactggaagaatttgagaggaagagacgtgca
cgcatgattcatgtcacaacagatgacagtgaggtgaagcagcagctgcggcagttggga
gagccaatctgcctgtttggggagggaccagcagaccgcagaaacaggctcaaggagctt
ttgtctcgcctgggagaggatgccctgaagaagacagtggcagggacacaagatgcggag
gcacctgagcaagagcagcagcgcccagaggaaacctggtaccacgagggtcctcagtca
ctgaaggaggctcgaacgtttattctcgaatattccattcccagagcaagagcgagattg
aagaaggaacatttggataacgagatcccagaggccactcgcacagccaggagacaagaa
gtgcagaacaaactgcggtctttcagtcttcttggaagtcaaaatgcagactccaggccc
atctctcattgtagttttagtcctaatggcaaactccttgcaacctcctcctggagtggg
ctttgcaaaatatggaaggttccagattgccaggaagagcaaaagatgtctggccacaat
tgttatgtagattgcatagagtggcatcccagtgccactctcacaatggaagcaaatgca
ctgaacttggtatcaagtggtcgtgatggtactgtccagctgtggaatttgtgtggagag
gctcttggggaactgccacgtcttgaagcaagagtgtcaagggtagtgttccacccaagt
gggaggtttcttggtgcgtgcgttcatgataacagctggcgtttgtgggaccttgagatt
caggaggaggtgctcttccaagagggacattccaaacctgtcttctgccttgacttccag
ggggacgggtccctggcagcaacaggggggatggatgcatttggtcgcatctgggatctc
agaagtggtaggtgcgtcatgttcctgactggacaccagaatgctattttgggtatcaat
tggtctcctgatggttatcatcttgttagtggaagcgaggacaattctgccagaatttgg
gatgttagagcacgtcgctgtatttacagcataccagcacacacagggatagtcacaggg
gctcggtacgataaaataggaggccagtatattgtcaccagttcatatgatggttctgtt
cgcttatggtgccacggatccttccagcccatgcgtgcactggaaggccatgggcagaag
gtcatgggggtagacatttcaccatcagacggaatcattgctacatgtgcctttgatcgg
acatttaaattgtgggggccagattaa
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