Penaeus monodon (black tiger shrimp): 119596480
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Entry
119596480 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119596480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119596480
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119596480
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119596480
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119596480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119596480
NCBI-ProteinID:
XP_037801682
LinkDB
All DBs
Position
3:complement(49374918..49401113)
Genome browser
AA seq
1906 aa
AA seq
DB search
MFGQPRAPFGGTTSSFGASFGTPSTTTTGFGSTTFGRATFGNPQQTTSFGTTTTPFGGAT
SSGTSLFGTQQQQATGGLFGQQQTQQPSAGFSHPSSGFGSTSGGGLFGQPQQPTSTAGLF
GSTGTSGFGAQQSTQSRPFGFGQTTTSTTAGAGGLFGTTQPATGGGLFSGTTGFGATGGA
VTGTTVKYEPVTGTDTMTRNGVSTNIRTRIEVISTMKEYENKSLEELRVEDYLANRKGPG
QGTTLAGFGQTPQATSTQPQMQGTGLFGSGTGTSLFGTAKPPENKSLFGTGTTSGFGATS
GGGLFGSGTSTAAFGQTSTAPATSFSFNQTTQQQQKTGAFSFGTTPTSTPSLFGSTPQQQ
QQPSFGFSGGFQLGQNTQQQNTGGGLFGNQKPGFFSNQNTGTGLFGSKPAGTTQPLSTGF
GTTNPVPPFGSTPNTSAGGGLFGAQNTQNKTGMFSGFGGSSAFGTTGLFGQNNNQQKPGS
LTFATPSFNPGLGQNLGSNTGMGLFNAGGTNTSGVGLGGGGLLSTNTGFGLPQQTAVGGG
AGGSAYPDLGKLVKALTEKPFLNITNNEKSTSDKASSPSDQGGSKLTSSNLKPTYVLSPS
LVANNKLKPKPITKNNNQGNDRHWLFKGLDDPNEESSEDFLKPKKYPSVRKLNLKVFKAA
KGDSSLSSPTISTTADKSGAGDAPSPLTTPVSPIGDGTPNRTSLPPSHDNSPTPDIIKGR
EKIKSLNLRSKPQMNDTLADLNVVQLAGAESVEGNLEAAENEEKDSSAEADKENISIFDV
SAAEDIPAMVNKSSDKPHPAGIKLTRSGYFTLPSLDVLAEMLDSDGQCLVENFTVGRYGY
GNVCFLGVTDVAGIDLDSVVFILRKQIEVYPEGTQKPPQGQELNKPAIITLDCVWPVDKT
TREVIKSSERLQAMGWADYLERQCVKMESTFVEYRPETGSWVFKVKHFSKYGLQEDDEEE
MVTAPPKTNVAAPLATHRAALSSTAAQLPPIPMRTSGPPATALTSPPQFGLSHMVMASLP
TKSMMQPRHLDSPSLQDTQAFDEEQMDSFIAKEAEESAAMTVLSPSAERLTVVSRVVPKT
VQLAKWQMFAGEEEEEAQQPTRESTPTPQVPRGSVKKLHLTTDISMNQTQRMTASPIPSE
PVKPKTVLQPQPVTLGSPPKANVQSESCPSAELRDPRSEYLLLQSGSDIGRESGHVPPQH
QTALVPLESSLLAGKDHLSADMGAFMGRSFRVGWGPGWRFVHAGPKLTPTLMEEEDDLRI
LKETALSMPSPASFLFMGSVHSQPRMMATADVPRYNLSVEKLHTVHHSPHHLTEASLERV
LEYSIVTCDEISDSTEPPCPHFRPVADVELLHQLAETASCFAQKDATVSNIFDLCVALWG
RLDFYSPESDGESEYAISRARVESLSLWLEAVSSAAVQEEVEVALNDEKNLESYLDAVFA
HLTARQISEACVLAQDKGDHHLALLLAQTCFGQDAPREILAQQLANWAEGGTDALMAPPR
LSLYALMAAAPTHQASHTTVNTCQGLDWRRALGLHLWYVCPATATIAEALQEYEQAAGLK
GDSPSYCDLPLPPYMMNQALPDQMKVSYDVCYHLLKLFTDPMHQLEVLLNPATITPDPVD
VSVSWLLWRVLESLGYSHLSQQVSANLHLSMAALLESAGNWHWAVFVLLNISDEERRSRE
VQELLRRHVAVGEEDESDPKYSMRERFVLEKLRIPQKWLHQAKATKARALDMVDEEAWYL
LKAGEYNRAHVLIVETIAPNSIINEDHEYLHGYLDQLCDDGVRNSVVDWAIGGGVYADYL
DVCSVVEDMKKSADPTPAKLEQLRPRLLALCSRLNNLKCHTATHRLCVSEMSRVVVGVLR
AVVGEGTDATQVLSQQLSGLPLTHDYALAELNLVTTHYLTHLAAER
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacagccacgagccccctttggaggcacaacctcctcctttggggcaagtttt
ggaaccccaagtacaacaacaactggctttggaagcacaacctttggaagggccacattt
ggaaatccacaacaaacaacaagttttggaaccacaacaacaccatttggtggtgctaca
tcgtcgggcacttccctctttggtacacagcagcagcaggcaacaggcgggctgtttgga
caacagcagacacaacagccttctgctggtttcagtcatcctagtagtgggtttggttca
actagtggtggtggattatttggacagccacagcaaccaacaagcacagcaggcctcttt
ggcagcactggcaccagtgggtttggtgcccaacagtcaacacagagtagaccatttggc
tttggtcagaccacaaccagtaccactgcaggagcaggaggtctctttggtaccacacag
ccagccactggaggaggattgttcagtggtacaacaggatttggtgccactggaggagct
gtcacagggacaactgtcaagtatgaacctgtaacaggcacagacactatgaccagaaat
ggtgtatccacaaacattcggacacgaattgaggtcatctcaaccatgaaggaatatgaa
aacaaatctctagaagagctacgtgttgaggattacttagctaaccgcaaaggtccaggc
caaggaacaactctagctggctttggtcagacaccccaggcaacaagcacccagccacag
atgcagggtacagggttgtttggctcaggtactggtacttctctctttggaactgcaaag
ccacctgagaataagtccctctttggcactggaaccactagtggttttggtgcaacctca
ggtggtggcctctttggaagtggaacaagcactgctgcatttggtcagacaagcactgct
ccagccacaagcttctcctttaaccagactacacagcagcaacaaaaaacaggggccttc
tcctttggtaccaccccaacatcaacaccatcactgtttggttcaacaccgcagcaacaa
cagcagccatcctttggctttagtggtggcttccaattgggtcagaacactcagcaacag
aatactggtggtggtctttttggaaatcagaaacctggattcttctcaaatcagaataca
ggtactgggctgtttggcagtaaaccggctggcacaacccagcctctgagcactggcttt
ggaaccaccaatcctgtaccaccatttggttcaaccccgaatactagcgctggtggggga
ctctttggtgcacaaaacactcaaaacaagactggaatgttctctggctttggtggtagt
agtgcttttgggaccacaggcttatttggtcaaaacaacaatcagcagaaaccagggagc
ctcacttttgcaacaccaagttttaaccctggtctgggtcaaaatttgggaagcaataca
gggatgggcttgttcaacgcaggtggcacaaataccagtggtgtaggccttggcgggggt
ggccttttaagcaccaatacaggttttggattgccacaacaaactgctgtcggtggggga
gcaggcggaagtgcatacccagatcttggaaaacttgtaaaggccttgacagagaagcca
tttttgaatataactaataatgaaaaatcaacatcagacaaagctagttcaccaagtgac
caaggtgggtcaaaactgactagctcaaacttgaaacctacatatgttctctcaccatca
ctagttgccaacaacaagctgaaacccaagccaattaccaagaataacaaccaagggaat
gacagacactggctcttcaaagggctggatgatcccaacgaggagagctcagaagatttc
ctaaaacccaagaaatatcccagtgtaaggaagttgaatctgaaggtgttcaaggctgct
aagggtgattcgtccctgagcagcccaaccatcagtaccacggctgataagtctggtgct
ggtgatgctccctctcccctcaccactcctgtcagtcccattggtgatggcacacccaac
agaactagcctccctccttcacatgacaactctcccacacctgacataatcaagggaaga
gagaagatcaagagtctcaaccttagaagcaagccccaaatgaacgacacattggccgac
ctcaatgtagtccagctggcaggagctgaatctgtggagggaaatctggaagctgcagag
aatgaagaaaaggactccagtgctgaggctgacaaggaaaacatttctatctttgatgtg
tcagctgctgaggatattccagctatggtcaacaaatcatctgacaagccacaccctgcg
ggtatcaaactcactcgatcagggtacttcactcttccctcactggatgtgctggcagag
atgttggactcagatgggcagtgcctagttgagaatttcactgtgggccgttatggatat
ggaaatgtgtgtttccttggtgttactgatgttgctggcattgaccttgattctgtggtg
ttcatccttcgaaagcagattgaagtttatccagaggggacacaaaagccaccacaaggc
caagaactcaataaacctgctattattacgctagattgtgtctggccagttgacaagacc
acacgagaggtgatcaaatcttcagaacgactccaggccatgggatgggcagattatctg
gagcgccagtgtgtcaaaatggaatcgacttttgttgaataccgcccagaaactggatca
tgggtctttaaggtaaaacacttctccaaatatggtttgcaagaagatgatgaggaggaa
atggtgacagctccacctaaaacaaatgtggcagctcctttagccacccaccgagctgct
cttagttctacagctgcgcagctccctcctattcccatgcgtacatctggtccccctgcc
actgccttgacctcacctccacagtttggacttagtcacatggtcatggctagtcttccc
acaaaatcaatgatgcagccaaggcaccttgatagtccatcacttcaagacactcaggcc
tttgatgaagaacagatggattcatttattgccaaggaagcagaggagagtgctgccatg
actgtgctgtcccccagtgctgaacgtttgacagttgtgtccagggttgtgcctaaaaca
gtccagctagccaagtggcaaatgtttgcaggtgaagaggaagaagaggcccagcaaccc
accagagaatcgactccaacaccacaggttccccgaggatctgtgaagaagcttcatctg
acaacagatatttccatgaatcagactcagagaatgacagctagtcccatccccagtgaa
ccagtaaaacccaaaactgtgctgcagccacaacctgtcaccttgggttcacctcctaaa
gctaatgtacagagtgagtcttgcccaagtgcagaattgcgtgaccctcgctcagagtac
cttttattacaaagtggaagtgacattggcagggagtctggtcatgtaccaccacagcac
caaactgctcttgtgccgcttgagtcctccctccttgccgggaaagaccacctctctgct
gacatgggagccttcatgggtcggtcattcagagtgggctggggtcctggttggaggttt
gttcatgctgggccaaaactcacaccaacattgatggaagaggaagatgacctaagaatt
ttgaaagaaactgctttgtccatgccatctcctgcatctttcctcttcatgggatctgtt
cattcacagcctagaatgatggctacggcagatgtaccacggtacaacttgtcagtggag
aaattgcacacagttcatcatagtccccatcatctaacagaagcaagcctggaacgtgtt
ttagaatacagcatagtaacctgtgatgagattagtgattctactgaaccaccatgtcct
cacttccgacctgtagcagatgtagagctgctccaccaactagctgaaactgcatcctgt
tttgcgcaaaaggatgccactgtatcaaatatatttgacctatgtgttgcactctggggg
aggctggatttctactctcctgaatctgatggggagagtgaatatgctatttcacgggct
agagtggagtccctcagcctgtggttggaggctgttagcagtgcagccgttcaagaggaa
gtggaagttgctctcaatgatgaaaagaatttagaaagttacttagatgcagtttttgca
cacctgacagctcggcaaatttcggaagcttgtgtccttgctcaggataaaggtgatcat
catcttgcccttttgttagcccaaacctgctttggtcaggatgctccaagagaaatccta
gcacagcaacttgctaattgggcagagggtggcactgatgcccttatggcaccaccacgt
ctctccctttatgcacttatggcagctgccccaacacatcaggcatctcacacaacagtc
aacacctgtcagggacttgactggagacgagctctaggcctacacctgtggtatgtatgt
ccagccacagcaacaatagcagaagcattacaagagtatgaacaagctgctggtctaaag
ggtgattctccaagttattgtgatctgcctttaccaccttacatgatgaatcaagcgtta
cctgatcagatgaaagtgagctatgatgtctgttaccaccttttgaagctgttcactgat
ccaatgcatcagttggaggttcttcttaatccagcaactataacacctgaccctgtcgat
gtatcagtaagctggctcttgtggcgtgtcctagagagtctgggttactctcatctttcc
cagcaagtcagtgccaatttgcacttgagcatggcagcccttttagagtcagcagggaac
tggcactgggcagtctttgttctactgaacattagtgatgaagaaagacggagtagagag
gtccaggaattgctcagacgacatgtagctgttggagaagaagacgagtcagatcccaaa
tacagtatgagggagagatttgtgcttgagaagttgcgcataccccagaagtggctacat
caagccaaagccaccaaagctcgggcattagacatggttgatgaggaagcttggtatctt
ctgaaggcaggcgaatacaaccgtgcacatgtacttattgttgaaaccattgctcctaat
tcaatcataaatgaggatcacgaatacctacatggatacctagaccaactttgcgatgat
ggagtccgtaatagtgtcgtggattgggccattggaggcggtgtttatgctgattacctc
gatgtctgttcagtagtagaagacatgaagaagtctgcagatccaacacctgccaagctt
gaacagttgcgacctcgtcttcttgctttgtgctccaggcttaacaacctcaaatgtcac
actgccacacacagactgtgtgtatcagagatgagccgagttgtagtgggagtcttgaga
gctgttgtaggtgagggaactgatgccacgcaggtcctgtcacaacagctgtctggtctg
cccctaacacatgactatgctcttgctgaacttaaccttgtcacaactcactatctcaca
catctggctgcggagaggtga
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