Penaeus monodon (black tiger shrimp): 119596787
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Entry
119596787 CDS
T08784
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119596787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119596787
03009 Ribosome biogenesis [BR:
pmoo03009
]
119596787
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119596787
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119596787
Pre-60S particles
119596787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TOR1L1_N
Cnd1
HEAT_GCN1
HEAT_2
IBN_N
HEAT_EF3_N
TPR_IMB1
Vac14_Fab1_bd
Arm
TPR_DNAAF5
TPR_IPO5
HEAT_MROH2B_C
HEAT_GCN1_C
PDS5
Ltn1_1st
Adaptin_N
MMS19_C
HEAT_GCN1_C_2
TPR_TTI1_C
HEAT_MROH2B_1st
VPS15-like_hel
Motif
Other DBs
NCBI-GeneID:
119596787
NCBI-ProteinID:
XP_037802040
LinkDB
All DBs
Position
38:30680418..30728894
Genome browser
AA seq
932 aa
AA seq
DB search
MGWNPDTDALAQILGLLRESQSPDTIVQQTVQQKLEELNKFTDFNKYLIYVLTKLTSEDE
PTRSLSGLILKNNVKAHFHQFPPDVAQFIKAECLSAVGDPSPLIRATVGILITTTASKGE
LSSWPELLPRLCEMLDSADYNVCEVSTITILDGARQKYYIICVYKRSKELGRLSGKCPSV
LCDSLHIRSGQRRVPYNIPYDIFVLTSQGEFTIDAFLQNLFHLAMDDDPDVRKNVCRALV
MLLDAHISSLIPHMHNIIEYMMIRTQDPDENVALEACEFWLSLAEHPICKETLKPHLPKL
IPILVRGMKYSEIDIILLKGDVEEDESVPDRSEDIKPWFHKSRHTIRHEPMENGGSGEEF
PDDESDDGLDDDSSLSDWNLRKCSAAALDVLANVFRDDMLPVILPILKETLFHQEWEIRE
SGILALGAIAEGCMNGMTQHLPELIPYLISCLKDKKALVRSITCWTLSRYCHWAVVLPDH
SYLKPLMYELLKCVLDSNKRVQEAACSAFATLEEEACTELVPYLADILKTLVFAFRKYQA
KNLLILYDAIGTLADSVGNYLNKEEYIQMLMPPLIEKWNVLKDEDKDLFPLLEVSYFTPS
QNIQPYFFTIVCDELLDFYCMISLISLFCEAPGAQQSAMNTQDFMIALDVWLRAHGHCGQ
TLNQTMAHAQNPEQFEAADKDFMIVSLDLLSGLAEGLNGHVGQLVQQSNIMQLLYQAMQD
PMPEVRQSSFALLGDLTKACFQHVAPCISEFMPILGQNLNPELISVCNNATWAIGEISVK
LGPEMRVYVNLVLTDLIFIINKPNTPKTLLENTAITIGRLGYVCPNEVAPLLQQFIRQWC
ISLRNIRDNEEKDSAFRGVCNMISVNPGGVVEDFIFFCDAIASWVNPKQDLKEMFHKILH
CFKEQVGEENWKRFTEQFPPPLKERLTQQYGV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaatccagatacagatgctttagcgcagattttaggattattacgcgagtca
caatccccggacacaattgtgcaacaaacagtgcaacagaaactagaagaactcaacaaa
ttcacagacttcaacaaataccttatatatgtcctcacaaaactaacatccgaagatgaa
cctacaagatccctaagtgggcttattttgaagaataatgtcaaggcacactttcatcag
tttccccctgatgtggcacagtttattaaggcagaatgtctatcagcagtcggagaccca
tcacccctcatccgggcaactgtgggcatcctcatcaccaccactgcatcgaaaggagag
ctttcctcatggccagagctcctccctagactctgcgaaatgctggactcagcagattat
aacgtctgtgaggtgagtacaataactatccttgatggagctaggcagaagtattacatt
atctgcgtatataaacggtctaaagagctagggagactatccggcaagtgcccttcggtc
ttgtgtgactccttgcacatcaggtcaggccagcggagagttccctacaatatcccctac
gacatcttcgttttgacttctcaaggcgagttcaccatagatgctttcttacagaatttg
ttccatttggccatggacgatgacccagatgtccgcaaaaatgtatgtcgagcccttgtt
atgcttctggatgctcacatttcctccttgattcctcatatgcacaacatcattgagtac
atgatgatcagaacacaggatccggatgaaaatgtagccttggaagcttgtgaattctgg
ttgtcgttggctgaacatccaatctgcaaagagaccctgaaaccacacctaccaaagttg
atacccatattagttcggggcatgaagtactctgaaatagatatcatccttctcaagggt
gatgttgaggaggatgagagtgtaccagatcgtagtgaagacattaaaccttggttccac
aaatctcgacacacaatccgtcatgaaccaatggagaatggaggtagtggggaggagttt
cccgatgacgagtctgatgatggtctagacgatgattcttctctgtcagattggaatttg
agaaagtgctcagctgctgcgttagatgttcttgccaatgtgttccgagatgatatgttg
cctgtcatcttgccaatattaaaagaaactctcttccaccaagaatgggaaattagagaa
tcaggtatccttgcactgggagcaatagcagaaggttgtatgaatggcatgacccaacat
ctaccggaactgatcccatacctgatcagctgcttgaaagacaagaaggcactggtgcgc
tccatcacctgttggacgttatcccgctactgtcactgggcagttgttctccctgaccac
tcctacctcaaacctctcatgtatgagctgctcaaatgtgtcttggacagtaataaacgt
gtacaggaggcagcatgttcagcttttgctacactagaggaagaggcatgcacagagttg
gttccatacttggcagacattctgaagactttagtatttgcatttagaaaatatcaggca
aagaatctcctgatactatatgatgctattggaaccttggcggactctgttggaaactat
ctcaataaggaagagtacattcagatgctcatgccaccattgattgagaagtggaatgta
ctcaaggatgaggacaaggatttgttcccacttctagaggtaagttatttcaccccttcc
caaaatatccagccttattttttcactatagtctgtgatgagctgttagatttttactgt
atgatttcactaatatccctgttctgtgaggctcctggtgcacagcaatcggcaatgaac
acacaggacttcatgattgccctagatgtctggcttcgagctcatggccactgtggtcag
acgcttaatcagaccatggcacatgcacagaatcccgagcaatttgaagcagcagacaag
gacttcatgattgtctccctagatctgctctcagggcttgctgagggtctcaatgggcat
gttggtcagctggttcagcaatccaacattatgcagctcctttaccaggctatgcaggac
ccaatgccagaagttagacaaagctcctttgcacttctgggtgacctgaccaaagcatgt
ttccagcatgtggctccttgtatatctgagtttatgccaatccttggtcagaatttgaat
ccagaattgatatctgtctgcaataatgcaacatgggccattggagaaatatctgtaaaa
ttaggacctgaaatgagagtttatgtgaaccttgtcctaaccgacctcatcttcataatc
aacaagcccaatactcccaaaactcttcttgaaaacacagccattacaattggacgccta
ggctatgtgtgccccaatgaagtggctcccctgttgcaacagtttatcaggcagtggtgc
atctccctacgcaacattcgagacaacgaggagaaggactctgcctttaggggtgtatgc
aacatgatcagcgtaaatccaggcggagtggtggaggatttcattttcttctgcgatgcc
attgcctcttgggtcaaccccaagcaagatctcaaggagatgttccataagatccttcat
tgcttcaaggagcaagttggtgaggagaattggaaacgtttcacggaacagttcccacct
ccattaaaggaacgcctgacccaacaatatggagtgtga
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