Penaeus monodon (black tiger shrimp): 119596980
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Entry
119596980 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04120
Ubiquitin mediated proteolysis
pmoo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119596980
04120 Ubiquitin mediated proteolysis
119596980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoo04121
]
119596980
Enzymes [BR:
pmoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119596980
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
U-box type E3
119596980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
119596980
NCBI-ProteinID:
XP_037802316
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All DBs
Position
38:14738735..14790013
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AA seq
1094 aa
AA seq
DB search
MLRFIRKKRLARLGGGTSSSNNNGDASQISIPQSPGVQLSTSPPGSSLITSPSKRHPPPS
PLDVTPCKKGVEPMEVETKGETMMDTGNSPHYRSDNKRHRSVSTTEVTEELVWATLSNLL
QATWQGVENACPLTVQITPGSKQPEVTSQVLMDVTLRLCSGELPEGLIDSNNCSSNSPEL
SASPTGSSSSSDVSALTKPLQCPEATALTYLLQTYSRVNNEEKIHPKRSSSPPLSSLLQD
VRQQCVAHVALLLSGNLTSTDLPVVSLLLYPLLTEGLPRGFLCHLINHTHKTQPLFVKVF
SPLLQGLSTAMRSCSVTSSTYIRVLESLVLLTDIKINSSRPICSLMVSMSNWLPKSESQS
AGRESISTTLLGPFLELSLFAEDDPRVVDKFIKHQGNSRTVPDGLLDLARELDLMRTTIL
HKLFYSILVNATSREPVLAYIARIIRANEKRAQIHVKEQMVAGDGPTINLLSVLQQLCFR
VNLEKVDPYYPFHPDSLVDVSKDSRLMMTQDEVDEWVKKLQAEQPSKFQEITFHSQCWFL
TLHAHHLGVLPVMRKYTRRIRAIRDLQKMVEEIESTESQWANLPVASRQRELLKKWKTQL
KKLNKSRICADAGLLDEKLLERCMHFYSDVAKIVLRALTGGPTSLAPLGSSLVETANLLP
LSPSIPELFAAMPEWYLDDMAEFLLFTLQYMPKVPIKHLEDPIITMTIVLLCTPTHIKNP
YLTAKLVEMVFMLTPSVQQHVDSLHQRILHHPLAVHLPVSLMKFYTMVETTGASSEFYDK
FTIRYHISVIFKSLWEDRGHRQAVITESNSGKEFVKFVNLLMNDTTFXLDESLDALKRIH
EVQEEMERGTWSQQTREQQQTRQRLLATDERQCRSYLTLARETVDMMHYLTKEVPAPFLR
PELCDRLAAMLNFNLAQLCGQKCGNLKVRQADKYGWEPRKLLEQIVDIYLHLDSTKFAQS
IANDERSFKRELFETAASKLERAVIKCQSEIAQFRSIGNKAFNVQQANQKKEEDYSDAPD
HFMDPLMQTLMEDPVELPSGVVMDRPTIVRHLLNDPTDPFTRQPLSEEQLKPAEALKKEI
SEWIASKSIPKSTS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcttcattcgaaagaagcgcttggctcggctcggtggaggaaccagcagtagc
aacaacaatggagatgcatcccaaatatccattccacagtccccgggggtacagttgtcc
acatcaccccctggatcatctcttattacttcgccttccaagagacatccaccaccttca
ccgttggatgtaacaccatgcaagaaaggtgtagaacctatggaagttgaaacaaaagga
gaaacaatgatggatacaggaaatagtcctcattaccgtagtgataacaagagacacagg
agtgtgagcaccacagaagtaacagaagaacttgtgtgggcaactctgtccaatcttctt
caggccacctggcaaggagtagaaaatgcatgtccacttacagttcagattacaccaggt
tcaaaacaacctgaagttacatcacaggtgttaatggacgttacactgagactgtgttct
ggtgaattaccagagggtcttattgatagcaacaactgttcatccaactctccagagctc
agtgcctctcctactggtagtagtagtagttcagatgttagtgcgcttacaaaaccatta
cagtgtcctgaagctaccgccctcacctacctcctacaaacttactctcgagtaaacaat
gaagaaaaaattcatccaaagagaagcagctctccaccattgtcatcattactgcaagat
gttcgtcagcagtgtgttgcacatgttgcattgcttctctcaggaaacttaacatcaact
gacctcccagtagtgtcactcctcctctatccattactgactgagggtctacctcgaggg
ttcctgtgtcaccttataaatcacacccacaagacccagcctctctttgttaaggttttc
agccccctcctacagggtcttagcacagccatgagaagttgtagtgtaacatcatccaca
tacattagagtcctcgagtccttagttttactgacagacatcaagattaattcttctagg
ccaatctgcagccttatggtgtcaatgagcaactggcttccaaagagtgagtcacagtct
gcagggcgggagtccatctcaaccaccctgctgggcccatttttggaactctctctcttt
gctgaagatgacccaagagtggtggacaagttcatcaagcatcagggaaatagcaggaca
gttcctgatggccttctggatctggcaagagaattagatctcatgcgtactaccattctt
cacaagctcttctacagtatcttagtgaatgccacttcccgtgagccagtacttgcttac
atagccagaattatccgagccaatgagaagagagcacagatccatgtgaaggagcagatg
gttgctggagatggcccaacaattaacctactctcagttctccagcagctttgcttcagg
gttaaccttgaaaaggtagacccatattacccctttcatccagactctctggttgatgtc
tccaaagattcccgcctcatgatgacacaggatgaagttgatgaatgggtgaaaaagcta
caagctgaacaaccatcaaagttccaagagataacatttcacagccagtgttggttcttg
acccttcatgcacaccaccttggagtgttacctgtcatgcggaagtacacacgccgcatc
cgagccattcgggatcttcagaaaatggttgaagaaattgaaagcacagaatctcagtgg
gccaaccttcctgtggcatcaaggcagagagagcttcttaagaaatggaagacccagtta
aagaaactgaataagtcaaggatctgtgctgatgccgggctgctggacgagaaattgttg
gaacgatgcatgcatttctactctgatgttgccaagatagtcttacgggcactcactgga
ggaccaactagtctggctcccctgggaagctctcttgtagaaacagccaaccttctcccc
ctgtcaccatcaataccagaactctttgctgccatgcctgagtggtacttggatgacatg
gcagagtttttgctttttacgttacagtacatgcccaaggtgcccatcaaacacttagaa
gacccaatcatcaccatgaccattgttcttttgtgtactcccacccatattaagaaccca
tacttaacagccaaacttgttgagatggtgttcatgttgaccccttcagtccagcaacat
gtcgatagcttacatcagcgcatccttcaccatccactagcagtacacctacctgtatct
ttgatgaaattttacacaatggtggagacaacaggagcaagcagtgagttctatgacaaa
ttcaccatccgttatcacattagtgtaattttcaagagcctttgggaagacagaggacac
aggcaagctgtaataacagagtccaattctggtaaagagtttgtgaaatttgtgaacctc
ctgatgaatgatacaacattcnctttggatgaatcattagatgctctgaagcgcatccat
gaagtccaggaggaaatggagagaggcacttggtcacagcagactagggagcagcagcag
acaagacagaggttgctggccacagacgaaagacagtgcagatcatacttgacattagca
agagaaacagttgatatgatgcactacttgacaaaagaggtgccagccccattcttaagg
ccagagctctgtgacagactggctgcaatgctcaacttcaaccttgctcagctctgtgga
cagaagtgtgggaatctaaaggtgcggcaagcagacaaatatggatgggagccaagaaaa
ctgctagagcagatagtggatatttacttgcatttagactcgactaagtttgctcaatct
attgctaatgatgagagatctttcaagagagagctgtttgaaacggcagcatccaagttg
gagcgagcagtgattaaatgtcagtcagaaattgctcaattccggagcataggaaacaaa
gccttcaatgtccagcaggccaatcagaaaaaggaggaggattacagtgatgctcctgat
catttcatggatccactgatgcagacactgatggaagatccagttgaacttccctcggga
gtagtcatggatagaccaacaattgtgcgtcatctgctgaatgatccgacagatccattc
acacgccaacctctttcagaagagcagctgaagccagcggaagctttgaagaaggaaatc
agtgaatggattgcctccaaaagtatcccaaagagcacatcttga
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