Penaeus monodon (black tiger shrimp): 119597368
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Entry
119597368 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear exosome regulator NRDE2-like
KO
K26109
nuclear exosome regulator NRDE2
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119597368
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119597368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
119597368
NCBI-ProteinID:
XP_037802854
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All DBs
Position
39:8678358..8684954
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AA seq
1220 aa
AA seq
DB search
RRRKRRKRKNKPGQHLHPHVSLNQVTGEGKRKRKPEVSPALIKIVTPRRRNSRSRSCGKV
SEGRYRSQSRYSSESRSRSRSRSRSSRSKSSPQERRKRRSKSRSRDWLSRKRKVRSRSRS
RSRSWEASSRSKDKRSYRSRSRNRKRSRLRSRSRNRKSSRRNRSQSRDRRRSRGRRSRTR
SVSREKINKKEEQTSKGGGTVLREKLLSGNKSVFLDDLKGLVRSEEAFYINVQGETANKT
FTSTHFSQLASYKMKIRGVLGDLEQNIGRPNKKALRYFKKSAQPSLYADSTFTKRIPTSS
KDEEDKDASYIPVQLTYVEEKLIKKETQPSYVDPLGIYDSKTQEYMLGIGGPDQEKNTST
QNAEYEYWQSQAKMFNERLGKEPTNISLWLEFVHFQDKAHVHLFRIEDTSEKNEKKKKMN
QKALAERKISILDTAIKKNIKSNELQFERLDIGQHIWDDKKLKNEWGTFLFNFPNKIKVW
HQYLSFSQTHFTTFNLSSVVKTFAKCTERLQQIQNGTFLTHAAPPNIGKCMVDVAVQLAT
VWRQAGFMERSIALFQALIEFNLFAPVHARDKKMTLEARLAFFEPFWDSRAPRFGEERSS
GWAQVVEQKQQVEFPEVILGGTQDEEDELLAAGGSTSRLWLMLETSRERRHWLPWEDDPE
ECEDPERMVSFEDLEPHIFCLEDPRDHFYMILQFFKFIGVPNISQFVSSTQERAMAKNQN
QNREVNDIFQPLTLESLLDIHLFGTCLQFEKNVKVGEFLNFSAIGPSLGTMLCQDYYRFV
CQAVLQASNLFPEPQRTNLILLYIRILGLRYSALRRNIKEKEKLRQFGKDIKKQVKKLVK
SEEFRSSLVIYEEYAKLEEIMEHFDDAENVYVIALTAGTATVGNGVSAPGGSILKAKRKL
FEIQESHTNTSFETCKTSKESDTERLLASKVIFFLSVIQLLTVGFKPACLIFETIIDKIN
GIFKEPVEVKLEEITLPGERKSIKMASSNQTSIQEKNRKKMLETLYEDYLWLIDVSSKLD
NLIRDGKMSPAVLRPLLADAVKSAPENPNFLVLLAQNQNWRDLLCGIDTHPRKIPSILTL
VSKLLPHLHKTLAHIANTEEGSLSCGYRLENVLETAVSRPPGRNCPLLWRLYLALVANTQ
PKKLKSLIYAAIFHCPGVKSLYLDCVRLMPSLLKEIVNLMAEKGVRVRLPLEELQVLLET
ELDLENDDEQLSPKEDEEEI
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
agaagaagaaaaagaagaaaaagaaaaaacaagcccggtcaacatctccatcctcatgtg
agtctgaatcaagtcacaggagaaggaaaaagaaaaagaaagccagaagtgagtccagct
ctgatcaagatcgtgacaccaagacgcagaaattccaggtctcgttcttgtgggaaagtg
tctgaaggtagatatagatcacagtcaagatacagttctgaatcaagatcaaggtctcgt
tctagatccagaagtagcaggtctaaatcaagtcctcaagaaagaaggaagaggagatct
aaatcaaggtcaagggattggttatcgagaaagagaaaagtcagatcaagatcaagatca
agatcacgaagctgggaggctagttcaagatcaaaggataaaaggagttacagatctaga
tccagaaacaggaaaagatcaaggttaagatcaagatctagaaatagaaagtcaagtagg
agaaatcggtctcaatcaagggataggaggaggtcaagaggcagacgaagcagaacaaga
tcagtttctagagagaagataaacaagaaagaggaacagacttctaaaggaggaggcact
gtattacgtgagaaattgttatctgggaataagagtgtattcttagatgacttaaaaggc
ttagtcagatctgaagaggcattctacatcaacgtacaaggagaaactgccaataagacc
tttacctcaacacatttttcgcagctggccagttataagatgaaaataagaggcgtactt
ggagatttagagcaaaatatagggaggccaaataagaaagctctcagatacttcaagaaa
agtgcacaaccatcattatatgcagatagtacatttaccaaaaggataccaacaagcagc
aaagatgaggaagacaaggatgctagttatataccagttcaacttacctatgtagaagaa
aaactcataaagaaagaaacccagccatcatatgtggatcctttagggatatatgacagt
aaaacacaagagtacatgcttggaataggtggtccagatcaagaaaaaaatacatcaacc
caaaatgcagaatatgagtactggcaaagtcaggctaaaatgtttaatgaaagactgggc
aaagaacctaccaatatatctctatggctagaatttgtacatttccaggacaaggctcat
gttcatctgtttcgcatagaagacacaagtgaaaaaaatgagaagaagaagaaaatgaat
cagaaagcattagctgagaggaaaatttcaattttggacactgccataaaaaagaatatt
aaatccaacgagttgcagtttgaacgtcttgatattggacagcatatctgggatgataaa
aaattaaagaatgaatggggtactttcttgtttaatttcccaaacaagattaaagtttgg
catcagtacttatcattctcacaaacccattttacaacatttaatttatcatcagttgtc
aaaacatttgcaaagtgtacagaaagattacagcaaatacaaaatggaacatttttaaca
cacgcagcaccacctaatataggaaagtgcatggtagatgtggctgtgcaattggcaact
gtttggcggcaagctgggtttatggaaagatcgattgctctgttccaggcacttatagag
tttaatttatttgcccctgttcatgcaagagataaaaaaatgacattagaggcaagactg
gccttttttgagccattttgggattcaagagctccaagatttggggaagaaagatcttct
ggatgggcacaagttgtggaacaaaagcagcaagtagaatttccagaagttattctagga
ggaacacaagatgaagaggatgaattattggcagcaggtggcagcacctcaagactctgg
ttaatgttagaaacctcaagggagcgacgacattggttgccatgggaagatgacccagaa
gagtgtgaagacccagagagaatggtttcgtttgaagatttggaacctcatattttttgc
ttagaagacccaagagatcatttttatatgatactgcagtttttcaaatttattggagta
ccaaatataagccagtttgtgtcatcaactcaggagagagccatggcaaaaaatcaaaat
caaaatagagaggtcaatgatatatttcagccacttactcttgaaagtctacttgatatc
catttgtttggcacttgtttacagtttgaaaagaatgtaaaagttggtgaatttttaaat
ttctctgccattggaccatcattagggacgatgctatgccaagattactatagatttgtt
tgtcaagctgtattacaagcatctaatttgtttccagaaccacagagaaccaatttgata
cttttatatataagaatacttgggcttcgctattcagctttgaggaggaatattaaggag
aaagaaaagctcaggcagtttggaaaagatataaagaagcaagtgaaaaagcttgtgaaa
tcagaagagtttagatcttctcttgtgatatatgaggaatatgccaaactagaagaaatt
atggagcactttgatgatgcagaaaatgtatatgttattgcacttacagctggaacagcc
acagtaggaaatggtgtctcagctccaggtggaagcatcttaaaggcaaaaagaaagctc
tttgagatacaagaatcacacactaacacttcatttgagacatgcaaaacaagcaaggaa
agtgacacagaaaggctacttgcaagtaaagttattttctttctcagtgtgatacagttg
ctaactgttggattcaaacctgcctgcttaatatttgaaacaattattgataaaattaat
ggcatcttcaaggaacctgtggaagtgaaactagaagaaattactctacccggtgaacga
aaatccataaaaatggccagctctaatcaaacttcaattcaagaaaaaaatagaaaaaag
atgcttgaaactctctatgaagattatctttggttgatagacgtttcttcgaagctggat
aacctcatcagagatggaaagatgtcacctgctgtcttaagaccactccttgctgatgct
gtaaaaagtgccccagaaaacccaaacttccttgtactactagctcagaaccagaactgg
cgagacctgctgtgtggaatagacactcatccaaggaaaatcccttccattttgactttg
gtctcaaagcttctcccacatcttcataaaacacttgcccatattgccaatacagaggaa
ggctccttgagttgtggttatcgtttggaaaatgttttggaaactgcagtcagtcgacca
ccaggtagaaactgccctctcctgtggcggctgtatctcgcactggttgctaatacacaa
cccaaaaagctaaagtcattgatctacgcagcaatatttcactgcccaggagttaagagt
ctgtacttagattgtgttcgtcttatgcccagcctattgaaggagattgtgaacctcatg
gcagagaaaggcgtaagagttcggctgccattagaggaacttcaggttcttttagaaaca
gagctggaccttgagaatgatgatgaacagttatcaccaaaggaagatgaagaggaaata
taa
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