Penaeus monodon (black tiger shrimp): 119597823
Help
Entry
119597823 CDS
T08784
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03410
Base excision repair
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119597823
03410 Base excision repair
119597823
03420 Nucleotide excision repair
119597823
03430 Mismatch repair
119597823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119597823
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119597823
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119597823
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119597823
DNA Replication Termination Factors
ELG1-RFC complex
119597823
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119597823
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119597823
Check point factors
HRAD17(Rad24)-RFC complex
119597823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_24
AAA_assoc_2
AAA_30
AAA_11
AAA_22
AAA_16
Mg_chelatase
AAA_19
DUF815
AAA_14
RuvB_N
ResIII
Gp44_lid
SLFN-g3_helicase
AAA_5
DNAX_ATPase_lid
AAA_7
bpMoxR
AAA_18
VipD-like_C
AAA_3
AAA_28
HdcB
Motif
Other DBs
NCBI-GeneID:
119597823
NCBI-ProteinID:
XP_037803392
LinkDB
All DBs
Position
40:complement(26270441..26278132)
Genome browser
AA seq
354 aa
AA seq
DB search
MHAFLKTGKLAAGGGQAGPSKEKVVRKKAPIPWVEKYRPKTVEEVAYQDEVVSVLKSTLQ
GADLPNLLFYGPPGTGKTSTILAASRQLFGDLFRQRVLELNASDERGIQVIREKVKTFAQ
TTVSSTRPDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKQSKTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLAQGILLKRLTYICEEENVKYEDSVLETLIGTSEGDLRRAITTLQSA
ARLRSGEQISKEDIYEITGVVPDKWLTELMEVCATNSYEKLSDFVNLMMAEGYSATQILN
QIHDIIMTNNQLNDIQKAAVYERLAMCDHRLIDGGDEYLQVMDLSCTVMKQMGN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccttcttgaagactggtaaacttgcggcaggaggtgggcaggctggaccaagt
aaagagaaagtggtgaggaagaaagcaccgattccatgggttgaaaaatatcgaccgaag
acagtagaagaagttgcttatcaggatgaggttgtgtctgtcctgaaaagcactttacaa
ggagctgatctgccaaatttgttgttctatggtccaccaggtacaggtaaaacttcaaca
atcctagctgcttccagacagttgtttggtgatctattccgacaaagagtattagagctt
aatgcttcagatgagagaggcattcaggttatcagagagaaggtaaagacctttgcccag
accacagtatctagcacaagacccgatggcaaaccatgtcctcctttcaagatcattatc
ctagatgaggctgactcaatgactaatgcagctcaagcagccctcaggcgaacaatggaa
aagcagtctaagacaacaagattctgtcttatctgtaattatgtgtcacgtattattgag
ccgctgacatccaggtgctccaagtttcgatttaaaccactagcacaaggcatcctactg
aaaaggcttacctatatctgtgaggaggagaatgttaagtacgaagattctgtcctggaa
accttgattgggacaagtgaaggtgatttacgaagagccattactacgctgcaatcagct
gcaagattgaggtcaggcgaacaaatatccaaagaagatatctatgaaataacaggagtt
gtcccagacaagtggcttacagaattaatggaagtatgtgctacaaactcatatgagaag
ctgagtgactttgtaaatctcatgatggcagaggggtattctgctacacaaatactcaac
caaatacatgatatcataatgaccaacaaccagctcaatgacattcagaaggctgcagta
tatgagaggctagctatgtgtgaccatcgactcattgacggtggcgatgaatacctgcaa
gtgatggacctttcttgcacagttatgaagcagatgggtaactga
DBGET
integrated database retrieval system
