Penaeus monodon (black tiger shrimp): 119598261
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Entry
119598261 CDS
T08784
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119598261
04121 Ubiquitin system [BR:
pmoo04121
]
119598261
Enzymes [BR:
pmoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119598261
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119598261
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119598261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
DUF5711
zf-RING_2
Prok-RING_4
zf-RING_UBOX
zf-RING_5
DUF948
COG5_N
Motif
Other DBs
NCBI-GeneID:
119598261
NCBI-ProteinID:
XP_037803838
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All DBs
Position
41:17617499..17621909
Genome browser
AA seq
880 aa
AA seq
DB search
MFCGLRGGDRACAMANAFPGGLGDAKERLDGLGPSGLGGLSAGGLGGLGNVAVSMAGSLG
SSGTLNLGNNSTGSSGGICPMCMGILEEARVLPCLHAVCSPCLDSLLVGTTLACPTCHTE
LNLDQPLDTLTAPPFLPSLLDIVSTDDDLPTNSPPTNVSKPPVPHINNREQLAPLPRIHK
ELSGGVRSKLYLCASCDDRQAATSRCRDCNEALCDSCVRAHQRVRLTKDHFIVRLSEDGN
GLIGVGGNGNGRVSGHSHYPEDNCHTPLSLSSPPPTLSSHSSPHPTVMYCSIHEGEVLRL
YCDMCNAAICRECTLRDHRGHSFIYLQDAAENSRSVTLKLLTDARTGIRTIEDSIGVTKR
MVDRVDLRAQAVASDVRSTTRRHISALEDRERKLLHKVEKIRQVKGKTLQDQIDDLSSAL
ARLTHTVDTVGSSVDSINHIELIQMRDKILAEMNELRQVKAHLSPHEDDNIVFTPPDVSL
YQAINAMGFISSSGYAPNSVAVGNGLKQALRGKLATFLVHGKDHLADQRLVGGDQVTVTV
HGPDGLSFKGDVQDRGNGSYLVSYRPQVEGQHMIAVQMRGIHIQGSPFTVQVKSGRSYSS
VGPVLLTLGGEGEGEGQLCRPWGVCCDKDGYIIIADRSNNRVQVFSPDGSFHHSFGTAGS
RPGQFDRPAGVAADHMGRIIVADKDNHRIQVFTFDGTFIFKFGEKGSKNGQFNYPWDVAV
NTEGNIVVSDTRNHRIQLFRADGTFINKYGFEGALWKHFDSPRGVCFNHEGHIVVTDFNN
HRLLVIHPDFQSARFLGSEGSSSGQFLRPQGVAVDQEGHIIVADSRNHRVQIFQPNGNFL
CKFGMPGSGQGQLDRPSGICVSPDGYIIVVDFGNNRVQVF
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcgggttgcgcggtggcgacagggcgtgcgcgatggcgaatgcattcccaggt
gggctgggtgacgccaaggagcggctggatgggctggggccatctgggctgggtggacta
agtgcaggcggcttgggtggcttagggaatgttgcagtgtccatggctggctcccttggc
agcagtggcaccttaaatcttggaaacaacagcacaggcagcagtggtggtatttgtcca
atgtgcatgggaatcctggaggaggctcgagtgctgccatgtctccatgcagtgtgcagc
ccatgcctagattctcttttagtgggcaccacccttgcctgtcctacatgtcacactgag
ctcaaccttgaccagccgctggacacattaactgcaccaccctttttgccatcactcctt
gacattgtatccactgacgacgacctccccaccaactctccacccactaatgtcagtaag
ccccctgtaccccacatcaacaatcgtgagcagctggcacctctcccccgtatacataag
gaactctcaggtggtgtgcggagtaagctgtatctctgtgcaagttgtgatgacagacag
gcagcaacttcacggtgtcgagactgcaatgaagccctctgtgactcttgcgttcgcgct
caccagagagttcggcttactaaagaccatttcattgtgagattatctgaggatggtaat
ggcctcataggagttggaggcaatgggaatgggagagtctccggccactcccactaccct
gaggataactgccacactccattgagtctgtcttcaccaccacctacactatcctcacat
tcctcgcctcatccaactgtcatgtactgcagcattcatgagggcgaggtgttacgactc
tactgtgacatgtgtaatgctgccatctgtcgggagtgcacactgcgggatcaccgtggc
cattccttcatttacctgcaagatgctgcagagaattcaagatctgtcacactaaagctc
ttaacagatgccaggactgggattcgcaccattgaagacagcattggtgtgacaaagcgc
atggttgaccgagttgatctacgtgcccaagcagttgcaagtgatgtacgttccactacc
aggagacatatttctgccctagaggaccgtgagcgaaagctgctgcataaagttgagaaa
attcggcaagtgaaaggcaaaacactacaggaccaaattgatgatttaagttctgcctta
gcaaggctaacccatacagtagatactgttggctcatcagtggacagcattaatcacata
gaactgatacagatgcgtgataaaattcttgcagaaatgaatgagttgagacaagtaaaa
gctcatcttagcccccatgaagatgataacatagtgtttaccccacctgatgtctctttg
tatcaggccattaatgcaatgggtttcatctcctcttctgggtatgcaccaaattctgtg
gcagtgggaaatggcttgaaacaagcattgcgagggaaattagctacttttttagtgcat
ggaaaggaccatcttgcagatcaaaggcttgtaggaggtgatcaagttacagtaactgtg
catggccctgatggtttgtcctttaagggtgatgtacaggatcgtgggaatggttcctac
ttagtaagctacagaccacaggtggaagggcagcatatgatagcagtgcagatgcgaggt
atacacattcagggctcacctttcacagtacaagtaaagtcaggaagaagttactccagt
gtgggacctgtgttattaactcttggaggagagggtgaaggggaaggtcagctatgtcga
ccctggggtgtctgttgtgacaaggatggttacatcatcattgctgacaggagcaataac
agagtgcaagtttttagtccagatggcagcttccatcattcatttggaacagctggttcc
cgtccaggacaatttgataggccagctggtgttgcagcagatcacatgggtcgcattatt
gtggctgataaggacaatcaccgtatccaagtgttcacttttgatggaaccttcattttt
aagtttggagaaaagggaagtaaaaatggacagtttaactatccatgggatgtcgcagtt
aatacagaaggaaacattgttgtttcagataccagaaatcatcgaatacaactctttcgg
gcagatggcactttcatcaacaaatatggctttgagggtgcactttggaaacactttgac
tctcctcgtggagtttgcttcaatcatgaaggtcacatagttgtcacagacttcaataat
catcgtcttttggtaattcacccagattttcagtcagcaagatttcttggtagtgagggc
tcatcatcaggccagtttttaaggcctcagggagtagcagttgatcaggaagggcacatt
attgtggcagattctcgtaatcatcgtgtccaaatattccaacctaatggtaattttcta
tgtaaatttggaatgccagggtctggccaaggccagcttgaccgtccaagtggcatatgt
gtgtctccagatggctacattattgtggttgactttggtaataatcgggtccaagttttc
tga
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