Penaeus monodon (black tiger shrimp): 119598956
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Entry
119598956 CDS
T08784
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04140
Autophagy - animal
pmoo04142
Lysosome biogenesis
pmoo04145
Phagocytosis
pmoo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119598956
04142 Lysosome biogenesis
119598956
04140 Autophagy - animal
119598956
04148 Efferocytosis
119598956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoo04131
]
119598956
Membrane trafficking [BR:
pmoo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119598956
Hops complex
119598956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
zf-rbx1
zf-RING_Vps41
PspA_IM30
zf-C3HC4_2
zf-ANAPC11
Occludin_ELL
KlcB_C
zf_RING_Vps8_fungal
zf-RING_11
OEP24
zf-RING_5
zf-RING_2
DUF8567
aq_1631
Motif
Other DBs
NCBI-GeneID:
119598956
NCBI-ProteinID:
XP_037804593
LinkDB
All DBs
Position
42:9777128..9780791
Genome browser
AA seq
969 aa
AA seq
DB search
MATLFDQYESQQQGLGGGPSQSILGTTTFKNQKLEEEAAIFLKDRQVNFAPPHPITHLVV
SNRHLVLAMANKTLIRINLLQPNSLEEVDISKFALQAKIHNIFLDPLGQHLLISVISRDG
STPVDTLYLPLRTNKPKSTAKLKGHLITSIGWNWKNQSESSTGPILVGTSKGLIMEMELT
SDERFFQSGHEEYCKQVFDLKKDAPVAVTEIEVCNAPTDDLQCLVLCATNDKLYQFAGRL
KSMEERPMYLSLFNNYLGLPPKFHILPSSWKTSWLQLYQLPNKGPKHFAWMTEEGVCTGD
IVWGGGAQDDMTVNKKLHTYPEGVDSSVLPCGLIVCEFHVLIVWPDRIRGLCILNNQVVF
EGVIPEECGKLVGISKDPIKGTIWVYAERGVFKYKVDREGRNVWRIYLDQGNYELAKKHC
NADPACLSVVLLQEAQDLFQKKEYLQSAMLFAKTLASFEEITLKFVEVEEEEALKIYLHE
KLDGLKKSEQTQVTLVVMWLLELYLKQLGNLRDAGKRHTQDYNNCDEQLKTLFHDPKVQQ
CVRNNSTAIYELLSSHDDQDNYVNVCLMLKDYDRVLRHLMRHGRHIEALNVMTNQGSEQL
FYQHIPALLQAIPRAAVDALIAQGRRLNPIKLLPSLVHCHTAYGNGADVLRYLEYCVDKL
DVTDQVLHNFLITLYASQAPKKLLPYFKLQGDDSQSVCYDVKFALRECMSVGEEQACVHI
LTTMGLYQEAVELALRLDTNLAKATANRPKYDQDLRKKLWLMIAAHVVQKEQDVSRAMEV
LKECDLIKIEDILPFFPDFVTIDQFKDAICSSLQEYNQHIEDLKTEMEDASKAAENIRKD
IQKFKQKYSYVHAQDRCCECNYPLLTRPFYLFPCSHKFHQDCLLDAVMNYLSDVKAKKVS
ELKGKLLAISNDESGTGAGGLWGDREQIRAEIDSIVAGECLYCGDNVVANVDTPFISDKE
WDAMMLEWQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgttcgaccagtatgagtcccagcagcagggcctgggcgggggaccgagc
cagtccatcctcgggacaacgaccttcaagaaccagaagctggaggaggaggcagcgatt
ttcctgaaggacaggcaggtaaacttcgcaccgccgcaccccatcacccacctggtcgtg
tccaaccgccacctggttctggccatggccaacaagaccctcattcgcatcaacctcctc
cagcccaactccttagaggaggtcgacatcagcaagtttgcgcttcaggccaagatccac
aacatcttcctggatccgctgggacagcacctcctcatcagtgtcatcagcagggacgga
agcaccccagtggacacactgtacctacccctgcgcacaaacaagcccaagtcaacggcg
aagctcaagggacacctcataacatccattgggtggaactggaagaaccaatcggagagc
tcgaccggccccatcctggttggcacgtccaagggcttgatcatggagatggagttgacc
tcggatgagagattcttccagtcaggtcatgaggaatattgcaaacaagttttcgatctg
aaaaaggatgcacctgtagccgtgacagagatagaggtgtgcaatgctcccacagatgat
cttcagtgtctggtgttgtgtgctacaaatgacaagctctatcagtttgcagggagactg
aaatccatggaggaaagacccatgtacttgtctctgtttaacaactaccttggcttaccc
ccaaaatttcacatcttgccaagcagctggaaaacttcatggcttcagctctatcagctg
ccaaataaggggcctaagcattttgcatggatgacggaggaaggggtgtgcactggggat
attgtatggggtgggggagcgcaggatgacatgacagttaacaagaaacttcacacttac
ccagaaggtgttgatagcagtgtcctcccatgtggattgattgtatgtgaatttcatgtg
cttattgtgtggcctgataggatacgaggcttgtgtatattgaacaatcaagtggtgttt
gaaggagtaattcctgaagagtgtggaaaactagttggcatttctaaagacccaatcaag
ggaaccatctgggtgtatgctgaacgcggagtcttcaagtataaggttgaccgagaaggc
cgtaatgtttggcgcatctacctggaccaggggaactatgaactggcaaagaagcattgc
aatgctgaccctgcttgcctgtctgttgtgctcctccaggaggctcaggacctctttcag
aagaaggagtacttgcagagtgcgatgctctttgcaaagactctagcatcttttgaagag
attactctcaaatttgtagaagtggaagaggaagaagctcttaagatatacctgcatgag
aaacttgatgggctaaagaagagtgagcagactcaggtcactttagtagtgatgtggctg
ctagagctctacctcaagcagttagggaacttgcgtgatgctggcaagagacacacacaa
gattataacaattgcgatgaacagctgaaaacactcttccatgatcccaaagtacagcag
tgtgttagaaataactccacagccatttatgaattgctctcctcccatgatgaccaggat
aactatgtcaatgtttgcttgatgttgaaagattatgatcgtgttttaaggcacctcatg
cgtcatggaaggcacatagaagccctaaatgtaatgacaaaccaaggttctgagcagctg
ttttaccaacacattccggcacttcttcaggctattccaagagcggctgtggatgccttg
atagcacagggcagaagactgaacccaatcaagcttctcccaagtcttgtccattgccac
actgcctacggaaatggggcagatgtgctgcgctatctggaatattgtgtggacaagttg
gatgtcactgatcaggtgttgcataactttttgattaccttgtatgcatctcaagctccc
aagaaactactaccctacttcaaactgcagggtgatgatagtcagagtgtgtgctatgat
gttaaatttgctttaagggaatgcatgtcagttggagaagaacaggcctgcgtgcacatt
ctaaccacaatgggactgtaccaagaggctgtggaacttgccctgagattagacacaaat
cttgcaaaggcaacagccaatcggcccaagtatgatcaagacttgcgcaagaagctctgg
ctcatgattgctgcccatgttgtccagaaagaacaagacgtgtcacgtgccatggaagtg
ttgaaggagtgtgaccttattaaaatagaagacatcctaccattcttcccagattttgta
accattgaccaattcaaagatgccatatgctcctcgctgcaggagtataaccagcatatt
gaagacctcaagacagaaatggaggatgcatcaaaggccgcagagaacatccgcaaagac
atccagaaattcaagcagaaatactcatacgtccatgcgcaggatcgctgttgtgagtgc
aactaccctctcctgacaaggcccttctacctgttcccatgctcgcataagttccaccaa
gactgcctcctggatgctgtcatgaactacctctctgatgtgaaggcgaaaaaggtatca
gaactcaaggggaaactcctagccatctcgaatgacgagagcggaacaggagcaggaggc
ttatggggtgacagggaacagattagggcagagattgacagcatcgttgctggggagtgc
ctctactgtggtgacaatgttgtagcaaatgttgacaccccatttattagcgacaaagaa
tgggatgcaatgatgttagagtggcagtga
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integrated database retrieval system
