KEGG   Penaeus monodon (black tiger shrimp): 119599246
Entry
119599246         CDS       T08784                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Pathway
pmoo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119599246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmoo03400]
    119599246
DNA repair and recombination proteins [BR:pmoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     119599246
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 LIG3_BRCT PTCB-BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 119599246
NCBI-ProteinID: XP_037804907
LinkDB
Position
42:26155924..26171774
AA seq 815 aa
MPTIKFSEVLSFTSEDPNHPADNLLRQETHRKWKCAAGLSEKQASVTLKLERLTSIRSID
IGNAGSAFVEVLAAREDANFKVLLVASSFMTPIESRNASDLHRVRMFGLDKLNKDVASEK
WDRIKVVCTQPFNKNLQYGLSFVTVSSAGEVRDPVILPLLGIYKLKTYFTLPDSRTLPGR
AEDGTPAPKGIAGSFTLKEEDESDPISVGSVFARRKEKDASPSPLSGAAAIRAASAAAAT
SSTATGGGGGGVGSPGPGSLKRKALENPPDVGFYQLKKKPAHETTESRNKERDKQKMERE
GSSTERKNTSERKEEKEKKKIKEREKGGGESSSSRKNSDRRKEEEETEKDGEEAKRETHK
KKREGSRGGDSKREKENLPTTSQKNHRKTEPFASLMKDVVFVMSGYQNPQRSNLRDMMLD
MGAKYKQDWEPSCSHLICAFTNTPKFLQVKGKGKIVTAKWITDCHKNKIRYPWRRYQLER
ERNADESEDEVWAEELLPKEEHRAKSPSQRRRPSEADVADTDSYNMATDGESEEDTDDEI
QRVLAKKKTSEREKESVKLQRMDSAERNKNGEKREPVSRKERETEREEEVECRREEEQQV
KTANGKLRGEGGAKRAKMETSGDEPKKTVNGRKEGAGKEQETSSLSVAEGWEKRKGGKQG
EKGGKTVERKEVEANGFAKGGKRKQEEDEEEEDYDADTDVDEDKKKYLQPPDTSALPLPC
LDDHFSGKTFFIYGRMDEHTKKMVRRYIIAFNGTLEEYMTGEVQYVVTEDEWDENFDAAL
EENSSLQFVKPTWIWQCSDRAKLVPHQPYLVVPRE
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgcctactatcaagttttccgaggttctatccttcaccagcgaggatcccaatcacccc
gcagataacctcctgaggcaggaaacacatcggaaatggaagtgtgcagcaggattatca
gagaaacaagcatcagttaccttgaagttggagcggcttacatccattcgctccattgac
atcggcaatgctggctcagcatttgtggaggttctggcagcacgggaggatgccaacttt
aaggtcctccttgtggcctcctcattcatgacccccatagagtcaagaaatgcatcagat
ctccacagagtgcgcatgtttgggcttgacaaactgaacaaagatgtggccagtgagaaa
tgggaccgcatcaaggtggtgtgcacacagcccttcaacaagaacctgcagtatgggctc
tcctttgtcacagtttcatcggctggcgaggtaagggaccctgttattttgcctttgctt
ggaatttataaattgaaaacttatttcacccttccggactctcgcactctcccaggaagg
gcagaggacggcacccccgcccccaaaggcatagctgggagttttaccctaaaggaggaa
gatgagtctgaccccatatccgttggctccgtcttcgcacgcagaaaggagaaggacgct
tcaccctcgcctctctcaggtgcagctgcaatcagagctgcctcggccgcagcagcaaca
tcatcaacagcaacaggaggaggaggggggggagtgggtagccctggaccggggagccta
aaaagaaaagccctggaaaacccaccagacgtgggcttctaccagctgaagaagaagcct
gcacacgaaacaacagaaagcagaaacaaagaacgtgacaaacaaaaaatggagagggaa
gggagcagcacagagagaaaaaatacatcagagagaaaggaagaaaaggagaagaagaag
attaaagagagagaaaaaggagggggcgaaagcagtagcagtagaaagaacagtgaccga
agaaaggaggaagaggaaacagagaaagatggagaggaggcgaaaagggagacccacaag
aagaagcgagaaggaagcagagggggagatagtaagagggagaaggagaatctcccaaca
acgtctcagaagaaccataggaagaccgagccgtttgcgtccctaatgaaggacgtagtg
tttgttatgagcggctaccagaacccccagaggtctaacctgcgcgacatgatgctggat
atgggggcgaagtacaaacaggattgggaaccctcttgctcgcacctcatatgtgctttc
accaacacacccaaattccttcaggtgaaaggcaagggaaagattgtaacggccaaatgg
atcacagattgccacaagaacaagatacgttacccatggagaaggtaccagttggagcga
gagcgaaatgcagatgagagtgaagacgaggtttgggctgaagagctcttgcccaaggag
gaacatcgtgccaagtctcccagccagagacgccgaccttcagaagcagacgtcgctgac
actgacagttacaacatggcaacagacggcgaaagtgaagaagatacagatgatgaaata
caaagagtactggcaaagaagaagacaagtgaaagagagaaagaatcagtgaaacttcaa
cgaatggactcggcagagagaaacaagaatggagagaagcgggagccagtttcaagaaaa
gaaagagaaacagaaagagaagaagaggtggaatgcagaagagaggaagagcagcaggtg
aaaacagccaatgggaagctgcgaggggaaggtggagcaaaaagggccaaaatggagacc
tcgggggatgaacccaagaagacggtcaatggacggaaggaaggagctggtaaggagcag
gagacgtcatccttgtccgtagcagaaggctgggaaaagcggaaaggagggaagcagggg
gaaaagggaggaaagacagtggaaaggaaggaagtggaagcaaatggctttgcaaaaggg
ggcaagagaaagcaggaggaagacgaggaggaggaggactatgatgctgacacagatgta
gatgaggacaaaaagaagtatctgcaacctcccgatacctcagccctgcccctcccctgc
ctggacgaccacttctctggcaagacgttcttcatctacggcaggatggatgaacacacc
aagaagatggttcgcagatatatcatcgctttcaatgggacgctggaggagtacatgact
ggagaagtgcagtacgtagtcaccgaggacgagtgggatgagaactttgatgctgccctg
gaggagaactcaagtctgcagtttgtcaagccaacttggatatggcagtgcagcgacagg
gcaaagttggtccctcatcagccgtacctggtggtgcccagggagtga

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