Penaeus monodon (black tiger shrimp): 119599363
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Entry
119599363 CDS
T08784
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119599363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119599363
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119599363
Spliceosome [BR:
pmoo03041
]
Complex C
Other components
Step II factors
119599363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
S1
Helicase_C
WHD_HA2
GIPC1_GH2
DEAD
AAA_22
AAA_19
OB_NTP_bind
PWI
nSTAND3
Myosin_head
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119599363
NCBI-ProteinID:
XP_037805060
LinkDB
All DBs
Position
42:complement(21400479..21414283)
Genome browser
AA seq
1205 aa
AA seq
DB search
MEDVFRLERLSLVSKICVELENHLGINDKDVAEFIIALAEKSKRLDKFKKELEENGGDQF
ADSFVESLWRLIQHMMPSLTAGPVPEKIKEEPGKPKTEKDWKREMLPFLALPNDPKVLNM
LDDELKPKVKEEPQAEHRLKNGSNKEKEKKKKKKKDKDREREKEDKQDRKVKPDPSLEVD
DLMAFLESHAPSKQNTKARSKSRSRSRSRSRSRSRSREKKRKSRERERRRSRSRSRDRER
ERDRDRDRDRDRDRDRERDRRRSRSQERYRGRRERSRSRDRHRDRKERDRRERSRSRGRD
RHSRRSRSRSRDRDREQERGRGSNRDAFINRPPDENPVVGKVYEGKVTNILNFGCFVQLE
GLRRRLEGLVHISQLRREGRVTNVSDVVVKGQKVKVKVLSFTGQKTSLSMKDVDQDTGED
LNPNVAPMGGNSQDEDAMRNPDRPMSLMELTKGTDEEDLATYKRVNRISSPERWELKQMM
AANCISKSEFPDFDEEQGVMGGEDDDEEDVEIELVEEEPAFLRGYGRVREELSPVRIMKN
PDGSLAQAAMMQSALAKERREVKMAQRESEMDSQPSNLGQNWNDPLPETQRIDPAMSRGM
PTQQQEVPEWKRHITGGTRGSYGKKTNMSLLEQRQSLPIYKLRDQLIKAVHDNQILIVVG
ETGSGKTTQITQYLAEVGFTAKGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRF
EDCTSSETVIKYMTDGMLLRECLIDPDMSTYACIMLDEAHERTIHTDVLFGLLKQAVAKR
PELKLIVTSATLDAVKFSEYFNQAPIFTIPGRTFPVEILYTREPETDYLDAALITVMQIH
LAEPPGDILVFLTGQEEIDTACELLYERMKALGSDVPELIILPVYSALPSEMQTRIFEPA
PPGSRKVVIATNIAETSLTIDGVYYVVDPGFVKQKVYNPKTGMDSLMVTPVSQAGAKQRA
GRAGRTGPGKTYRLYTERAYRDEMLPTSVPDIQRTNLAATVLQLKAMGINDLLGFDFMDP
PPTDAMVMALETLHSLSALDDEGLLTRLGRRMAEFPLDPNLSKMLIMSVHLQCSDEILTI
VSMLSVQNVFYRPKEKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQ
MRTLKRAQDVRKQLLGIMDRHKLDVVSCGKNVARAQKAICSGFFRNAAKKDPQEGYRTLV
DSQVV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgttttcagactcgagaggctttctttggtctccaagatctgcgtggagttg
gagaaccacttaggaatcaacgataaagatgttgcggagttcatcattgccctggcagag
aagagcaaacgcctggacaagttcaaaaaggagcttgaggaaaatggaggagaccagttt
gctgattcatttgtagagagtttgtggaggttgatccagcacatgatgccatccctcaca
gccggtcctgtgccagaaaagataaaggaagagccagggaagccaaagactgagaaggac
tggaaacgtgaaatgctgcccttcttggccttgcccaacgatcccaaagtactcaacatg
ctggatgatgagcttaagcctaaggtgaaggaggagccccaggcagaacaccgtctcaag
aatggcagtaacaaggagaaagagaagaagaaaaagaagaagaaagacaaagaccgtgaa
cgggagaaggaggacaagcaagacaggaaggtgaagcctgacccatcgctggaggtggat
gacctgatggcctttctagagtcgcatgctccctccaagcagaacaccaaggccagaagc
aagagcagaagcaggagtaggagcagaagcaggagtaggagcaggagcagggaaaagaag
aggaaatcaagggagagggagaggaggaggagcagaagccgcagcagggacagagagagg
gaaagggacagggacagggacagggacagggacagggacagggacagggaaagagacagg
agaaggtcgaggagccaggaaaggtacagagggaggagggagcggagccgcagccgagac
aggcacagggataggaaggaaagggacaggagggagaggagcaggagcagggggagagac
agacactcgagaagaagcagaagccgcagcagagacagagaccgagaacaggaaagagga
agaggaagcaatcgtgatgccttcatcaacaggccgcctgacgagaaccctgttgttggg
aaggtttatgaaggtaaagttaccaacatcctcaactttgggtgctttgtgcagctggaa
ggactgcgaaggagactggaaggtctggtccacatttcacagctgcgcagagaagggcgt
gtgacaaatgtgtcagatgtggtagtgaaggggcagaaagtgaaggtgaaggtcctgtct
ttcacgggccagaagacgtcactgtccatgaaggatgttgaccaggacacgggtgaggac
ctcaaccccaatgttgcaccaatgggaggaaatagccaggatgaggatgccatgaggaac
ccagacagacccatgtcactcatggagctgaccaaaggcacagatgaggaagacttggct
acgtacaagcgtgtgaatcgcatctcgtctccagagcggtgggagctgaagcagatgatg
gcagcaaactgcatcagcaaatctgaattcccagactttgatgaggagcagggtgtgatg
ggtggagaggatgatgacgaagaggatgtggagattgagttggtggaggaggagccagcc
ttcttgcgtggctatgggagggttcgagaggagctgagtcctgtgaggatcatgaagaac
cctgatgggtctcttgcacaagctgccatgatgcagagtgccctggctaaagagcggcgt
gaggtgaagatggctcagagggagagcgagatggactcacagccttccaaccttggccag
aactggaatgaccctctgcctgaaacccagaggatagatccggccatgtcacgtggcatg
cccacacagcagcaagaggttccagagtggaaaagacatatcacaggtggtacaagagga
tcatacggtaaaaagacaaacatgtcccttctggaacaacgacaaagcctcccaatctac
aagctccgtgaccagctgatcaaggctgttcatgataaccagattctcattgttgttggg
gaaacagggtcagggaagacgacccagattactcagtatttggcagaagtgggtttcaca
gccaagggtaagattggttgcacacaaccaaggagagtggcagcaatgtctgtggccaaa
agggtgtcagaggagtttggttgtcgccttggccaggaggttggctacactatccgattt
gaagattgcaccagttcagagactgttatcaagtacatgacagatggtatgttactgaga
gagtgcctcattgatccagatatgtccacatatgcatgcattatgttggatgaggctcac
gagaggacaatacacactgatgtgttgtttggtctcctgaagcaggctgttgccaaaagg
cctgagctaaagctgattgtgacatcagccaccctagatgcagtgaaattctctgagtac
tttaaccaggctccaatcttcaccatccctggccgcaccttccctgttgagattctttac
acccgagagcctgagactgactacctggacgcagcactaatcactgtgatgcagatccac
ctggcagagcctccaggggacatccttgtgttccttacaggtcaagaggagattgacaca
gcatgcgagttgctgtatgagcgcatgaaagccctgggtagtgatgtacctgagctgatc
atcctccctgtgtactcagcccttccatccgagatgcagacaaggatctttgagcctgcc
ccccctggctccaggaaagttgtcattgccaccaacattgctgagacctcgctgaccatt
gatggtgtctactatgttgttgatccaggatttgtgaagcagaaagtttacaaccccaag
acaggcatggactccctgatggtgacacctgtctctcaagctggagccaagcagagggca
ggacgtgctggtcgcacaggccctggcaagacctacagactctacactgagagagcatac
agagatgagatgttgccgacaagtgtgccagacattcagcggacaaatttggcagccact
gtgcttcagcttaaagctatggggattaacgatctcttgggctttgacttcatggacccg
ccccccacagatgctatggtcatggcactggaaaccttgcattcactaagtgcactggat
gatgagggtctgctgacaaggctggggcgcaggatggctgagttcccccttgacccaaac
ctttccaagatgctcatcatgtcagttcacctgcagtgttctgatgaaatcctgaccatt
gtctccatgctgtctgtgcagaatgtgttctacagacccaaggagaagcaggctctggca
gaccagaagaaggccaagttcaaccaggcagagggcgaccacctcaccctccttgccgtc
tacaactcgtggaagaacaacaagttctcaaacgcctggtgctatgagaactttgtccag
atgcgcacactgaagagggcacaggatgtgaggaagcagctcttgggcatcatggacagg
cacaagctggacgtggtctcttgtggcaagaatgtggccagagcccagaaggccatctgc
tccggattcttccgtaatgcggccaagaaggacccgcaggagggctaccgaaccctagtc
gactcacaggtggtctaa
DBGET
integrated database retrieval system
