Penaeus monodon (black tiger shrimp): 119599463
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Entry
119599463 CDS
T08784
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04080
Neuroactive ligand-receptor interaction
pmoo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119599463
04082 Neuroactive ligand signaling
119599463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmoo04040
]
119599463
Ion channels [BR:
pmoo04040
]
Ligand-gated channels
GABA-A
119599463
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
FraC
Motif
Other DBs
NCBI-GeneID:
119599463
NCBI-ProteinID:
XP_037805178
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Position
42:10531675..10554259
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AA seq
666 aa
AA seq
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MIGGTLTRRAVWCWWWWRWWVLAILAATITSSEGFSSTYSASSYSKNVTSLLDSLLSDYD
RRIRPGYGGPPTTIRVNMNVRSMGPFSEKQESYSMQLYLRQVWFDPRLRFNKTDLGKREF
SMNWMFAARLWKPDTFFINGKNSYAHKITAPNTFIRLQHDGQITWSLRLTVRASCKMHLR
KFPLDTQLCPLSLASYGYNATDIVYKWAPQLVTVDSDVSIAQYELVKITTNSTKVTVRRK
ENREPEEISILSVKFHLKRLTGFFLLQVYVPCILIVCCSWVAFWITKKDVPGRVCLGATT
VLSLTKIGFGGKTSMPKVSYPTSLDYFVILCFTFVFGAIVEYTMMHFLERSTNKRRKAME
QHQKEVEERTRTSEVQGQQRAAEKDATMMVTTTVKEDGVDIGSSLRETLKVPLTVVPLGV
SAIDEEQEDEGGAKQAGSPTSSRAGDGSPLDTKSPLKEALKLPLSVVPGSLEAVREGGEG
DSDGLRARNVSAAKREGEDPDSGAEGDRSVVSAEADAAPAVRPGEGWVSASDSCSVSSKS
SLFRLRKDASAAAKKERLDSESDLTVIKVDIQADEEEEEPPPPRPYTVWQILTWKRKLMA
EMSPANVIPSEEDVLDRFSVIDLYARRIFPTAFFILFTVYWVMFNYYITDEFPHETKEPS
DGLVVV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatagggggcaccctgacccgccgcgcggtatggtgctggtggtggtggcgatggtgg
gtgctagcgatcctggctgccaccatcacgagctctgagggctttagcagcacctactcc
gcctccagctacagtaaaaatgtgactagcctcctggatagcctgctgtcggactacgat
cgcaggattcgcccgggctacggaggtcctcccacgaccattagggtgaacatgaacgtc
aggtcaatgggtccgttcagcgagaagcaagagtcctattccatgcagctctacctccgc
caagtgtggttcgacccccggctgcgcttcaacaagacggaccttgggaagcgggaattt
tcaatgaactggatgttcgccgctcgcctgtggaaaccggatacctttttcatcaacggg
aaaaattcctacgcccacaagatcaccgcgcccaacacctttatcagattgcaacacgac
gggcagatcacgtggtcgctaagattaacggttcgagccagctgtaaaatgcaccttcgg
aagttccctttggacactcagctgtgtcctcttagcttagcgtcttacgggtataacgcc
acagacatagtgtacaagtgggcgccccaactggtgaccgtcgacagcgacgttagtatc
gcccagtatgagttggtgaaaattacgaccaattcaaccaaagtcaccgtcaggagaaaa
gaaaatagggaaccagaggagatctcaattctcagcgtgaaattccacctgaagaggctg
accggcttcttcctcctacaagtatacgtcccgtgtatcctgatcgtgtgctgttcgtgg
gtcgccttctggatcacgaagaaggacgttccaggacgcgtctgtctcggtgcaacaaca
gtgctttcactaaccaagatcggtttcggaggcaagacgtccatgcccaaagtatcgtac
ccgacgtccttagattacttcgtgatcctgtgctttactttcgtcttcggggccatcgtg
gagtacaccatgatgcacttcctcgagaggtcgactaacaagcgtcgcaaggccatggag
cagcaccagaaggaggttgaggagagaactcgaacgtccgaggtccagggacagcaaagg
gccgccgagaaggacgccacgatgatggtgacgacgacggtcaaggaggacggcgtggac
atcggctcgtcgctgcgggagacgctgaaggtgccgctgacggtggtgcccctcggcgtg
agcgccatcgacgaggagcaggaggacgagggcggcgccaagcaggcgggctcgcccacg
tcatcgagggcgggcgacgggtcgccactcgacaccaagtccccgctgaaggaggcgctg
aagctgccgctgagcgtggtgccggggagcctggaggccgtgagggagggcggcgaggga
gacagcgacgggctgcgggcgcgcaacgtgtcggcggccaagcgggagggcgaggatccc
gacagcggggccgaaggcgaccgcagcgtggtgagcgcggaggctgacgcggcgccggcg
gtgcgcccgggcgagggctgggtgtcagccagcgacagctgcagcgtcagcagcaagagc
agtctgttccggctgcggaaggacgcgtcggcggccgccaagaaggagcggctggacagc
gagagcgacctgacggtgatcaaggtggacatccaggcggacgaggaggaggaggagccg
ccgccgccgcgcccctacaccgtgtggcagatcctgacgtggaagcggaagctcatggcc
gagatgtcgccggccaacgtcatcccgtcggaggaggacgtcctcgaccgcttctccgtc
atcgacctgtacgcccgcaggattttcccgacggcgttcttcatcctgttcaccgtgtac
tgggtcatgttcaattattacataacggacgagttcccccacgaaaccaaagagccctcg
gacggcctcgtggtcgtgtag
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