Pseudomonas moorei: PMm318_A01710
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Entry
PMm318_A01710 CDS
T11016
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmor Pseudomonas moorei
Pathway
pmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMm318_A01710 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmor03019
]
PMm318_A01710 (rhlB)
Enzymes [BR:
pmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMm318_A01710 (rhlB)
Messenger RNA biogenesis [BR:
pmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMm318_A01710 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BFT59412
LinkDB
All DBs
Position
181427..182914
Genome browser
AA seq
495 aa
AA seq
DB search
MTVLKALKKMFGKSETEQLAPVPSAPSHTPSHRADGHQPGRAATAAAPKHEPKPAAAEQP
AVTTVTEQPRSETPKPAKPRREPKPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHA
IQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMG
EPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLESRHCDILVATP
GRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFT
EDVMNLAKQWTTDPAIVEIEITNVANENVEQHIYAVAAADKYKLLYNLVNDNGWERVIVF
ANRKDEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHI
DGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCE
TPPTHLLRAVERKRP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaaaatgttcggtaaaagcgagactgagcaactcgcg
ccagtccccagcgctccgtctcacacacccagccaccgcgccgacggtcatcagcctggt
cgggccgccaccgccgcggcaccgaaacacgagcccaagcccgcagcggccgagcagcct
gcggtgaccactgtcaccgaacaaccgcgcagcgaaacgccaaaacccgccaaaccgcgc
cgcgaaccgaaaccaaaagccccggtgatcccgtggaaactcgaagatttcgtcgtcgag
ccacaggaaggcaaaacccgcttccacgatttcaaactcgccccggaactgatgcacgcc
atccaggacctgggcttcccgtattgcacgccgatccaggcccaggtgctgggcttcacc
ctcgcgggcaaagacgccatcggccgcgcccagaccggcacgggcaagaccgccgcgttc
ctgatctcgatcatcacccagctgctgcaaaccccgccgccgaaagagcgctacatgggt
gagccacgggcactgatcattgcgccaacccgtgaactggtggtgcagatcgccaaggac
gccgccgacctgaccaagtacaccggcctcaatgtcatgaccttcgttggcggcatggac
ttcgacaagcaactcaagcacctcgaatcccgccactgcgacatcctggttgccacgccg
ggccgcctgctggacttcaaccagcgcggcgacgtgcacctggacatggtcgaagtcatg
gtgctggacgaagccgaccgcatgctcgacatgggcttcatcccgcaagtgcgccagatc
attcgccagaccccgcccaagagcgagcgtcagacattgctgttctccgcgaccttcacc
gaagacgtgatgaacctcgccaagcaatggaccaccgacccggccatcgtcgaaatcgaa
atcaccaacgtggccaacgaaaacgtcgagcagcacatctacgcggtggccgctgccgac
aaatacaaactgctctacaacctggttaacgataacggctgggagcgagtgatcgtgttc
gccaaccgcaaggatgaagtgcgacgcatcgaagaacgcctggtgcgtgatggcatcaat
gcggcgcagttgtccggcgacgtgccgcagcacaagcgcatcaagaccctggaaggtttc
cgcgaaggcaagatccgggtgctggtggccactgacgtggccggacgcggcatccacatc
gacggcatcagccacgtgatcaacttcaccctgccggaggttccggacgactacgtgcac
cgcatcggccgtaccggtcgcgctggcgcagacggcgtgtccatcagctttgccggtgaa
gacgactcctaccagctaccgtccatcgaagagaagctgggtcgcaagatcagctgtgaa
acaccaccgacgcatctgctgcgtgcggttgagcgcaagcgcccgtaa
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integrated database retrieval system
