Pseudomonas moorei: PMm318_A03870
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Entry
PMm318_A03870 CDS
T11016
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pmor Pseudomonas moorei
Pathway
pmor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PMm318_A03870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmor02022
]
PMm318_A03870
02035 Bacterial motility proteins [BR:
pmor02035
]
PMm318_A03870
Two-component system [BR:
pmor02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PMm318_A03870
Bacterial motility proteins [BR:
pmor02035
]
Pilus system
Twitching motility proteins
PMm318_A03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
Mg_chelatase
AAA_19
Pre_tape_measure
AAA_16
HTH_28
HTH_23
Latarcin
Motif
Other DBs
NCBI-ProteinID:
BFT59628
LinkDB
All DBs
Position
422147..423484
Genome browser
AA seq
445 aa
AA seq
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MNKRPRQKVLIVDDEPDIRELLEITLGRMKLHTCGARNVGEALGLLKRETFDLCLTDMRL
PDGTGLELVQHIQQRYPQVPVAMITAFGNVETAINALKAGAFDFLSKPVDLGRLRELVTS
TLLLAVPGNAIDRRLLGDSLPMRDLRKQIDKLARSQAPVYISGESGSGKELVARLIHERG
PRGHRPFVPVNCGAIPSELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRSVGGQQEEMVDVRILCATHKDLSAEVAAERFRQDLYYRLNVIE
LRVPPLRERRDDIEPLASHVLMRLAADTGQPAATLHPQALDALKNYRFPGNVRELENMLE
RAHTLCENKQIEASDLRLAEGNCAAEAGLRDLTQIDNLEAYLENVERQLILQALEETRWN
RTAAAQRLNLSFRSMRYRLKKFGLD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaagagaccacggcaaaaagtcctgatcgtcgacgacgaaccggacatccgcgaa
ctccttgaaattaccctgggacggatgaaactccacacctgcggcgcccgcaatgttggc
gaggccctgggtctgctcaagcgcgaaacgttcgacctgtgcctgaccgacatgcgcttg
ccggacggtaccggtcttgagctggtgcagcacatccagcaacgttacccgcaagttccg
gtggccatgatcaccgccttcggcaatgtcgaaacggcgatcaatgcactgaaggccggc
gccttcgacttcctgagcaaaccggtggaccttggccgcctgcgggaactggtcaccagc
accttgctgcttgctgttcccggcaatgccatcgatcgtcgcctgctgggcgattcgttg
cccatgcgcgacctgcgcaagcagatcgacaaactggcgcgcagccaggcgccggtgtac
atcagcggcgagtcaggcagcggcaaggaattggtcgcgcgcctgatccatgagcgagga
ccgcggggccaccgcccctttgtgccggtcaactgtggggcgattccatcggaactgatg
gagagcgagttcttcggccatcgcaaaggcagcttcagcggtgccattgaagacaaaccc
ggactgttccaggcggcccacggcggcaccctgtttctcgacgaagtggctgatctgccg
ttgccgatgcaggtcaaactgctacgcgcgattcaggaaaaagccgtgcgcagcgtcggc
gggcaacaggaagagatggtcgatgtgcgcatcctctgcgccacccacaaggatctctct
gccgaagtcgctgccgaacgctttcgccaggatttgtactatcgcttgaatgtcattgaa
ctgcgggttccgcccctgcgcgagcgccgcgacgacatagaaccacttgccagccatgtg
ctcatgcgcctggccgccgacaccgggcaaccggcagcaacactccacccgcaagccctc
gacgcgctgaaaaactaccgctttccaggcaatgtgcgcgaacttgaaaacatgctcgaa
cgagcccacaccctgtgcgaaaacaaacagatcgaggccagcgacctgcgcctggccgag
ggcaactgcgccgctgaagcgggcttgcgtgacctgacacagatcgacaacctggaagcg
tacctggaaaacgtcgagcgccagctcattctccaggccctggaagaaacccgctggaac
cgcacggcagcagctcagcggttgaatttatcgtttcggtcgatgcgctaccgattgaag
aaattcggcctggattga
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