Pseudomonas moorei: PMm318_A07920
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Entry
PMm318_A07920 CDS
T11016
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pmor Pseudomonas moorei
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmor03009
]
PMm318_A07920 (dbpA)
Enzymes [BR:
pmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PMm318_A07920 (dbpA)
Ribosome biogenesis [BR:
pmor03009
]
Prokaryotic type
rRNA helicases
PMm318_A07920 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
BFT60033
LinkDB
All DBs
Position
861386..862771
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AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALILCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLRKGSLVLHGLNTLILDEADRMLDMGFYDSIEEIIMQAPER
RQTLLFSATYPVGIKQLASKFMRNPQQVKAEAFHDDTQIEQRFYEISPEERMSAVTKVLG
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDSLDMVINVELARDSEIHIHRVGRTGRAGEKGLAISLVAPSEAQRAQAIE
QLQKSPLTWDQVDNLTSQGGGPLLPQMSTLCIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactttgccgctgtccgccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcaaagcttgccggtgatc
ctcaaggggatggacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttc
ggtatcggcctgctgaacccgatcaatccgcgctacttcggttgccaggcactgatcctg
tgcccgacgcgcgagctggccgaccaggtcgccaaggaaatccgtcgcctggcccgtgcc
gaagacaacatcaaggtcctgaccctgtgcggcggcgtgtccctcggcccgcagatcgct
tcgctggaacacggcgcgcacatcatcgtcggcacgccggggcgcattcagcagcacctg
cgcaaaggttcgctggtgctccatggcctgaacaccctgatcctcgacgaagccgaccgc
atgctcgacatgggtttctacgattccatcgaagaaatcatcatgcaggccccggaacgt
cgccagaccctgctgttctccgccacctacccggtgggcatcaagcaattggcctcgaag
ttcatgcgcaatccgcagcaagtgaaggccgaggcgttccacgatgacacgcagatcgag
cagcgcttctacgaaatctccccggaagagcgcatgagcgcggtgaccaaggtgctgggc
cacttccgtccggcgtcctgcgtagccttctgcttcaccaagcagcaggttcaggaaacc
gtcgatcacctgaccgccaaaggcatttccgccgtcggcctgcacggcgatctggaacag
cgtgatcgcgatcaggtcctggcgatgttcgccaaccgcagtacttcggtactggtcgcc
accgacgttgcagcacgcggcctggacatcgactcgctggacatggtgatcaacgtcgag
ctggcccgtgactcggaaatccacatccaccgcgtcggccgtaccggtcgcgccggtgag
aaaggcctggcgatcagcctggtggcgccgtccgaagcccagcgcgcccaagccatcgaa
cagttgcaaaaatcgccgttaacctgggatcaggtggacaacctcacgtcccagggcggc
ggtccgctgctgccacagatgagcaccctgtgcatcggcgccggccgcaaggacaaggta
cgcccgggcgacattctcggcgcactgaccggcgatgccggtattcccggcgctcaggtg
ggcaagattgcgattttcgatttccaggcctatgtggcggttgaacgcggcatcgccaag
caagccctgcaacgcctgaacgacggcaagatcaagggccgttcgctgcgcgtgcgtatt
ttgtaa
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