Pseudomonas moorei: PMm318_A12500
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Entry
PMm318_A12500 CDS
T11016
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmor Pseudomonas moorei
Pathway
pmor03030
DNA replication
pmor03410
Base excision repair
pmor03420
Nucleotide excision repair
pmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMm318_A12500 (polA)
03410 Base excision repair
PMm318_A12500 (polA)
03420 Nucleotide excision repair
PMm318_A12500 (polA)
03440 Homologous recombination
PMm318_A12500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmor03032
]
PMm318_A12500 (polA)
03400 DNA repair and recombination proteins [BR:
pmor03400
]
PMm318_A12500 (polA)
Enzymes [BR:
pmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMm318_A12500 (polA)
DNA replication proteins [BR:
pmor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PMm318_A12500 (polA)
DNA repair and recombination proteins [BR:
pmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PMm318_A12500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMm318_A12500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BFT60491
LinkDB
All DBs
Position
complement(1340526..1343330)
Genome browser
AA seq
934 aa
AA seq
DB search
MNQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLRMGAEDPEKLYELYTLLEFKSWLNDLQRDAKRIELSA
AAEPAPVVDLFSAAEAEAPAVSSETRYETVLDQARFDVWLEKLHNAKLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DMNILANCAIGGDQANGITVRGIAFDTMLESYVLNSTATRHDMDSLALKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQALFEKLNAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAALLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGTILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDYRLPKVLMEYRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPAGYKLLAADYSQIELRIM
AHLSRDEGLMNAFRHNLDVHTATAAEVFKVELADVTSDQRRSAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVRQYMDRTRAQAADQGYVETFFGRRLYLPEINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLID
QVSDEIRLHMSGAAKLDVPLLVEVGVGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcccccctcgtcctggtcgacggttcttcgtacctgtaccgcgcctttcac
gcgctgccgccactgaccacgtccaaaggcctgccgaccggtgcggtcaagggcgtactg
aacatgctcaagagtctgcgcaagcaatatccggacagcccgttcgcggtggtgttcgac
gccaagggtgggacatttcgcgatgacatgtacgccgaatacaaggccaaccgtccgagc
atgcccgacgacatgcgcgtacagattgagccgctgcatcagagcgtgatcgctctgggc
ttcccgctcctgtgcgttgaaggcgtcgaagccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccgatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagcagcatggacgtagag
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattatctggcgctcatg
ggcgattcttccgacaacattccgggggttccgggcatcggtccgaaaaccgcttccggc
ttgctggtcggtgtgaatggcgggctgaccgagctctacgcgcagctcgatattgtgccg
accctaccgatccgcggcgccaagaccctgccggccaagctcgaagagcacaaggaaatg
gcgttcctgtcctatcagttggcgaccatcaaggtcgatgtgccgctggacatcggcctc
gatgacctgcgaatgggggctgaagatccggaaaaactctacgagctctacaccctgctg
gaattcaagagctggttgaacgatctgcaacgcgatgccaaacgcatcgagctgagcgct
gccgccgagccagcgccggtcgtcgatctgttcagcgccgccgaggccgaagcgccagcg
gtcagctctgaaacccgctacgaaaccgttcttgatcaagcacggttcgacgtctggctg
gagaaactgcacaacgccaaactgttcgccttcgacaccgagaccaccggcatcgacgcg
caacaggcgcaactggtgggcctgtcgttcgccgtgcaggccaacgaagcggcctacatc
ccgctgacccactcctacatcggtgtgcccgagcaactggaccgcgacaccgtcctgcgc
gccctcaaaccgattctggaagacccgaacaaactcaaggtcggccagcacgccaagttc
gacatgaatatcctggccaactgcgccatcggtggtgaccaggcaaacggcatcacggtg
cgcggcatcgccttcgacaccatgctggaatcctacgtactcaactccaccgcgactcgc
catgacatggacagcctggcgctgaagtacctggatcacaccaccgtgagtttccaggac
atcgctggtaagggtgccaagcagctgacgttcgaccagattgcccttgagcaggccggc
ccttacgccgccgaggacgccgacatcactttgcgtctgcaccaggcgctgttcgagaag
ctcaacgccatcccgagcctggccagcgtgctgaccgatatcgaaataccgttggtgccc
gtgctggcgcgtattgaacgccagggtgcctttgtcgatgccgcgctgctgggcgtacag
agcattgaattgggcgacaagatggtggccctggagcgcgaagccttcgagattgctggc
gaggagttcaaccttggctcgcccaagcagctcgggaccatcctctacgagaagctcggt
ctgccggtgctgaagaagaccgccaagggccagccatccacggctgaagaagtactggcc
aaactggccgaggatgactatcgcctgccgaaagtgctgatggaataccgttccatgagc
aagctgaaaagcacctacaccgaccgcttgccggagcagatcaacccgcgtaccgggcgc
atccacacgtcttaccatcaggccgtggcatccactggacgcctgtcctccagcgatccg
aacctgcagaacattccggtgcgcaccgctgaagggcgtcgcatccgccaggctttcgtg
gccccggccggttacaagttactggcggccgactattcgcaaatcgagttgcggatcatg
gctcacctgtcccgtgatgaaggcttgatgaacgccttccgtcacaatctggacgtgcac
accgcgaccgccgccgaggtgttcaaggtcgaactggccgatgtcacttccgaccagcgc
cgtagcgccaaggcgatcaacttcggtctgatctatggcatgggcgcgcaaaagctcggc
aaggacattggcgtggacaccaagaccgccaaggcctacatcgatacttacttcgcccgt
taccccggcgttcgccaatacatggaccgcacccgtgcgcaggcggcggaccaagggtat
gtggagacgttcttcgggcgacggctgtacctgccggagatcaactccaacaaaccgcag
gagcgcgccgccgctgaacgcacggcgatcaacgctccgatgcaaggcacggcggcggac
atcatcaagaaagccatggtcgcggtggataactggctggccacatccggcctcgatgcc
aaagtcatcctgcaggtgcacgatgaattggtgcttgaagtgcgtgaagatcttatcgac
caggtcagcgatgaaattcgcctgcacatgagcggcgcggcgaagctggacgttccgttg
ctggtggaagtgggcgtaggcaacaactgggatgaggctcactga
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