Pseudomonas moorei: PMm318_A13800
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Entry
PMm318_A13800 CDS
T11016
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pmor Pseudomonas moorei
Pathway
pmor02025
Biofilm formation - Pseudomonas aeruginosa
pmor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PMm318_A13800 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PMm318_A13800 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmor02044
]
PMm318_A13800 (tssM)
Secretion system [BR:
pmor02044
]
Type VI secretion system
Imp/Vas secretion system core components
PMm318_A13800 (tssM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_29
SRC-1
Motif
Other DBs
NCBI-ProteinID:
BFT60621
LinkDB
All DBs
Position
1481228..1484749
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AA seq
1173 aa
AA seq
DB search
MKKIFKKVGAFLRKTWVWTLLLVMFVALLVWFVGPLLAVDDYKFWEASTSRLLTISALSL
IWGLTMVFVGWRAGVRKKAIEDSEGGQDRIRREELIDEAQKELKARFKDALKTLKTSSLY
RGRSERWRGDLPWYLLIGPQGSGKTSLLDFSGLEFPINKIDRKLTRDTRGTSHCDWYFAD
HGVLIDTAGRYMTQADTVDTHAWNTLLDLLRKGRRDRPLNGVLVTIPAHILLNDEQDIES
LAHSVRARLQEVHQKLHVDVPIYLVLSKADGLPGFEAFFDQLTRDESDQVLGATFRKDQN
GADVAVLRGEFEALLYRLNSQLIMRMHQERDTRRRGRILDFPHQLGRIGERLCLFVDMAF
TGNRYQRGSQLRGFYLTSSPYLTEEMDETAASIGAKLAVKTGVLPTLRNGRSRFAHHLFS
RVIFPEADLAGLDKRERSRIHWGQRALYVGSLAVLVLFGVLWASGFSANYERLEKLRSLA
QAWTQQRATPATGDDSMAVLKTLDTRYAATQVFPKKGDVGYHERGGLYQGEDVSPVVKAA
YEHDLEEQLLPQVAILLEGQIRANMKDRERLLNSLRAYLMLNFKDRRDVPWLKDWVAGEW
SRRYPGNTDLQNGLNNHFERLLKKPFIYPLNDQLVAQARQVLRSESLVNVVYRMLREQAR
ILPEYRLGQHLGPQGAKLVGTDYVIPGFYTQQGYQQYFSVQGSILVTDILRDNWVLGEGS
GISDMDLRRLMIELEQLYFRDYANYWGEAVGRVALPEISDFAEVAELLAGLTSANSPVLK
LLVEVRENTRFPVIADLANGAADTAGKLEDKGGKLGKLAVAAAGKASETLVKKLPDTARK
SLQNRFESLHRLLDDNNGPIAELTPVLSALNDLQMQMASLSRASLPEQAAFEMAKTRMGG
QRDALSSLRHAAGRLPRPVGVWFNVLAEDTWRLILGDSYRYLNHRYQNELYSFYDKAIGK
RYPFNAHSASDVAINDFSEFFKAQGIADRFFDGYLRPFVSGDPGHYRMRSLDGQSLPISR
VYLDQMAAALVIRQSFFANSPAEPQVTFKLEPYTLDPAVSRSEFKFGDKTIEYRHGPIVP
VSFKWPSDAEDGRTSLVLDKMVGRPLGIEKNTGPWSLFRLFDLMQTEYLSGRDVLVLKAD
VGGLRANYLLTSQRTPNPFDMGVLRSFRLPAQL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattttcaagaaagtcggcgcgttcttgcgcaagacctgggtctggaccctg
ctgctggtgatgttcgtcgcgctgctggtgtggttcgtcgggccgctgttggcggtagac
gactacaagttctgggaagcctcgacctcccgcctgctgaccatcagtgcgctgtcgctg
atctgggggctgacaatggtcttcgttggctggcgcgcgggtgtacgcaagaaagccatc
gaagacagtgaaggtgggcaggatcgaatccgccgtgaagagctgatcgacgaggcacag
aaggagttgaaggcgcgtttcaaggatgcgctcaagaccctgaagacctcgagcctgtat
cgcggtcgcagcgaacgctggcgcggtgatttgccctggtacttgctgatcggaccgcag
ggcagcggcaagaccagtttgctggacttctcgggccttgagtttccgatcaacaagatc
gaccgcaaactgacccgtgacacccgcggcacaagccactgtgactggtatttcgccgac
catggcgtactgatcgacaccgctggccgttacatgacccaggcagataccgtcgatacc
cacgcctggaacacattgctcgacctgctacgcaagggtcgccgcgaccgtccattgaac
ggtgtgctggtgaccattccggcgcatatcctgctcaacgatgaacaggacattgaatcc
ctggcccactcggtgcgtgcgcgcctgcaagaggtgcatcagaaattgcacgtggatgtg
ccgatttaccttgtattgagcaaggccgatggcctgccgggctttgaagcgttttttgac
caattgacgcgtgatgaaagcgatcaagtgctcggtgccactttccgcaaggaccagaac
ggtgctgatgtggccgtgctgcgcggcgagttcgaggcgttgctgtatcgcctcaacagt
cagttgatcatgcgcatgcaccaggagcgtgacacccgacgtcgtggccgcatcctcgac
tttccgcatcaactggggcgaatcggcgagcgtctgtgcctgttcgtggatatggccttc
accggtaaccgctaccagcgtggcagccagttgcgcggcttttacctgacaagttcgcct
tatctgactgaggaaatggacgaaaccgccgccagtattggcgccaaactggccgtcaag
accggtgtgctgccgaccctgcgcaatggccgctcgcgcttcgcgcaccatttgttcagc
cgagtcatttttcccgaggccgatcttgctggcctggataaacgcgaacgcagccgaatc
cactggggccaacgtgcgctgtacgtgggttcattggccgtactggtgctattcggggtg
ctctgggccagtggtttctctgccaactacgagcgcctggaaaagctgcgcagcctggca
caagcctggacccaacaacgcgcgacgccagccaccggcgatgactcgatggcggtgctc
aagacactcgacactcgctacgcggcaactcaagtgttcccgaagaaaggcgacgtgggt
taccacgagcgcggggggctgtatcaaggcgaagacgtcagccccgtggtcaaggccgcc
tacgaacatgatcttgaagagcaactgttgccacaggtcgcgatcctgctggaaggacag
attcgcgccaacatgaaggatcgcgagcgcctgctcaacagcctgcgtgcctacctgatg
ctcaatttcaaggatcgccgcgacgtgccgtggctcaaggactgggtagccggcgaatgg
tcccggcgttacccaggcaataccgacttgcaaaacggcttgaacaaccacttcgagcgt
ttgctcaagaagccgttcatttatccgcttaacgatcagttggtggctcaggcacgtcag
gttctgcgcagcgagtccctggtcaacgtggtgtaccggatgctgcgcgagcaggcccgc
attctgccggagtaccgcttgggccaacacctgggcccccagggggcgaagcttgtcggt
accgattatgtgatcccggggttctacacccagcagggctatcaacagtatttttcggtg
cagggctcgatactggtcaccgatatcctgcgtgacaactgggttctgggtgaaggctcc
ggcatcagcgatatggacttgcgtcgcctgatgattgagctggaacagctgtattttcgc
gactatgccaattactggggtgaggcggtgggccgggtcgcgttgccggaaatcagcgat
ttcgctgaagtcgcggagctgttggcgggcctgacgtcggccaattcgccggtcctgaag
ctgctggttgaagtgcgtgaaaacactcgttttccggtgatcgccgacctggcaaatggc
gccgccgatacggcagggaaactggaggacaagggcggcaagctcggaaaattggcggtc
gctgcggcaggcaaggcgtctgaaaccctggtgaaaaaactgccggataccgcgaggaaa
tccctgcaaaatcgttttgaatcgctgcaccgcttgctcgatgacaacaacggcccaatt
gctgagctgaccccggtactgtccgccctcaatgacctgcaaatgcagatggccagcctg
tcccgtgccagtctgccagagcaagcggcgttcgaaatggccaagacccgcatgggcggc
cagcgagatgcgctgagcagcttgcgccatgcggccggccgtctgccgcgtccagtgggc
gtgtggttcaacgtattggctgaagacacctggcgtctgatactcggagactcctaccgg
tacctgaatcaccgctatcaaaatgagctgtacagtttctacgacaaagcgatcggcaag
cgctatccgttcaacgcccacagcgccagcgacgtggcaatcaacgacttcagcgagttc
ttcaaggcgcagggcattgccgaccgcttcttcgacggctatctgcgtccgtttgtcagc
ggtgatccgggtcactaccgcatgcgtagccttgatggtcagagtctgccgatttccagg
gtctaccttgatcagatggccgctgcgttggtgatccgccagagctttttcgccaacagc
ccggccgagcctcaggtgacgttcaaactggagccttacaccctcgacccggctgtcagc
cgttccgagttcaagtttggcgacaagactatcgaataccgccatggaccgatcgtgccg
gtgtcgttcaagtggccgagcgacgctgaagacggtcgtaccagtctggtgctcgacaaa
atggtcggtcgcccgctgggtatcgagaagaacactggcccctggtcgctgttccgtctg
ttcgatttgatgcagaccgaatacctgagcggtcgcgacgtgctggtgctcaaggctgat
gtgggcggcctgcgcgccaactacctgctcaccagtcagcgcacgcccaacccgttcgac
atgggcgtattgcgtagcttccgcctgccggcgcagctttga
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