Pseudomonas moorei: PMm318_A18640
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Entry
PMm318_A18640 CDS
T11016
Symbol
recD_1
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmor Pseudomonas moorei
Pathway
pmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMm318_A18640 (recD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmor03400
]
PMm318_A18640 (recD_1)
Enzymes [BR:
pmor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMm318_A18640 (recD_1)
DNA repair and recombination proteins [BR:
pmor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMm318_A18640 (recD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
AAA_17
AAA_16
SLFN-g3_helicase
T2SSE
AAA_28
PhoH
AAA_25
NTPase_1
TraI_hel_assoc_N
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BFT61105
LinkDB
All DBs
Position
2040882..2042975
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AA seq
697 aa
AA seq
DB search
MSRTFADLLPTSLADESLAELAPLSRADDLLLLLTRWVERGWLRALDKAFVTFLHELAPD
DDPLVLLAAALTSHQLGHGHVCLDVFETLKEPDFALSLPPEGDLHSGVMVLPSQLLVALD
GAHWCKVLASSSLVALAADGREAVHSRPLVLSGKRLYLRRYWAYERRIDNALRQRLAEHE
ATPGDLPERLTGLFGAAKPGEVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALL
QAPAVEAGKPLRIRLAAPTGKAAARLTESISQQVRTLKVSDAIRQKIPSDVTTVHRLLGS
RPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEA
GAVLGDLCRDAEAGWYNPQTRQWLEAVSGESLAASGLQEDTQGAHPLAQQVVMLRHSRRF
GEGSGIGQLARWVNQQQPDEARKLLAARSHDDVFSLSLKNEQDRALERLLLDGHGEGPQG
YRHYLSLLRNQRPAIDRPLDDACWMDWAREVLKAFDAFQLLCAVRKGPWGVEGLNRRVTD
ALLKARLIDSDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPERDGPDAGKQVLRVAFP
RNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGIT
RAKDWFTLIEPRAGVFEEAVRRKVKRLSGLMLELGSD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaccttcgctgacctgttgcccacttcattggccgacgagagtctcgccgag
cttgcccccctgagccgtgctgacgacttgctgttgctgctcacccgctgggtcgagcgt
ggctggttgcgcgcgctggacaaggccttcgtgaccttccttcatgaactggcgccggat
gacgaccccttggtgctgctggccgcggcattgaccagtcaccagttgggccacgggcat
gtttgcctcgacgtgttcgagacattgaaggagccggacttcgccctgtcgctaccaccg
gaaggtgatctgcacagtggcgtgatggtgttgccgtcgcagctgttggtcgcgttggac
ggcgcccattggtgcaaagtgctggcctccagcagtctggtcgcgttggcggccgacggg
cgtgaggcggtgcacagccgtccactggtgttgtcgggcaagcgcctgtacctgcgccgt
tactgggcttacgagcgccgtatcgacaacgcgttgcgccaacgcctggccgaacatgaa
gcaacgccgggcgacttgcccgagcgtcttaccggattgttcggtgcggccaagccgggg
gaggtgatcgactggcagaaactcgcctgcgccctcgctacccgaggcgccttcagcatc
gtcaccggcggaccgggaaccggcaagaccaccactgtcgtgcgcttgctggcgttgctt
caggcgccagcggtagaggcgggcaaaccgctgcgcattcgtctcgccgccccgaccggc
aaagcggcggcgcgcctgaccgagtccatcagtcagcaagtcagaacgctcaaagtcagc
gacgccatacgccagaaaatcccttcggatgtcaccaccgttcaccgtctgctcggcagc
cgtcccggtacgcggcatttccgtcaccacgcgggcaatcgcttgccgctggacgtgttg
gtggtggacgaagcctcgatgatcgacctggaaatgatggccaacctgcttgatgcgctg
ccaccccatgcgcgcctggtgttgctgggggacaaggatcaactggcctcggtggaggcc
ggtgccgtgctgggcgatttgtgtcgcgatgccgaggccggctggtacaacccgcaaaca
cggcagtggctggaagcggtcagtggcgaaagcctggcggccagtggcttgcaggaagac
acccagggcgctcatccactggcccagcaagtggtgatgctgcgtcactcgcggcggttt
ggcgagggcagcggcattggtcagctcgcccgttgggtcaatcaacagcagcccgatgaa
gcccgtaaattgctggcggcgcgaagccatgacgatgtgttttccctgtccctcaagaac
gaacaggaccgggcgctggagcgtttgttgctcgatggccatggtgaagggccacaaggt
tatcggcattacctgagcctgttacgcaaccagcggccggcaatcgaccgtccgctcgat
gatgcgtgctggatggattgggcgcgggaagtcctgaaagccttcgacgctttccaattg
ttgtgcgctgtccgcaaagggccgtggggtgtcgagggcttgaaccggcgagtgaccgac
gcgttgctcaaggcccgcctgatcgacagcgaccagcagtggtacgaggggcgtcccgtg
ctgatgacccgcaacgactatggtctgggcttgatgaatggcgacatcggcattgcgctg
aaactccccgaacgggacggtccggacgccggcaagcaggtgcttcgcgtggcgttcccg
cgcaacgacgggcagggcggcgtgcgctttgtcctgcccagccgcctgaacgacgtcgag
accgtgtacgccatgaccgtgcataaatcccagggctcggaatttacccacaccgcgttg
attttgcccgatgccctgaacccggtgctgaccaaggaactgatctacaccgggattacc
cgggccaaggactggttcaccttgatcgagccgcgcgccggggtctttgaagaagcggtg
cggcgcaaggtcaaacgcttgagcgggctgatgctggagctcggcagcgattaa
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