Pseudomonas moorei: PMm318_A19120
Help
Entry
PMm318_A19120 CDS
T11016
Symbol
recB_2
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pmor Pseudomonas moorei
Pathway
pmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMm318_A19120 (recB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmor03400
]
PMm318_A19120 (recB_2)
Enzymes [BR:
pmor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMm318_A19120 (recB_2)
DNA repair and recombination proteins [BR:
pmor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMm318_A19120 (recB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_25
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BFT61153
LinkDB
All DBs
Position
2102137..2105814
Genome browser
AA seq
1225 aa
AA seq
DB search
MSPVNLNPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLGHGGENAFKTPLTPPQILVV
TFTDAATQELRDRIRARLTEAAQCFLEPDRKHDKLLQQLRDECPSEQWPDCARRLQLAGE
WMDEAAVSTIHGWCYRMLREHAFDSGSLFTQTLETDQSELLAEVVRDYWRRHFYELPVEQ
ARAIGDCFKSPQELGDALGSLLTRQDATYQYKAQPLEAPGSLQALLQEPGEWYATVGELE
RNARQLWQQHQVEVEALLQSVRARMHGGTYKNAGQDDVFNGYLRDLEQWSRGQPAPEKIK
AFSQSGLRLTGKDKVPQHEVLQAIDAWLEKRNAKVDIKAQVLLHALHEVHERFDEEKRRR
AEIGFDDLLNRLDHALQSSSGPRLAETIRKQYPVALIDEFQDTDPVQYRIFETIYRISEN
LDDCGLFLIGDPKQAIYSFRGADIYTYLQARGATAGRHYTLGTNYRSTQAMVDAANHCFE
FAELQPRGAFRFAKEDQGNPVPFNTVQANGRDDILQINGTDQPALTFWHLETPGVINNAT
YLRKAAEASASAIQAWLDPAAIKRSGLLSNKGEFVALRPADIAILVRNRKEAEAIRKALA
QRQLASVYLSDRDSVFESDEAKDLLYILRACAQPTSDRLVRAAMATRSVGLPWQTLEQLN
QDELFWEQQVLLFRDLRVMWQQQGVLPMLRKLLATFKVPARLLLEDQGERRLTNLLHLAE
WLQRSAAELDGEHALIRHLAEQVDGQSEEEILRLESDSDLIKVITVHKSKGLEYPLVLLP
FACSAREIDGKSKTPPMFHDENDSLVIELVKGDSAKPAQVRANDERMGEEMRLLYVALTR
ARYATWICMAAQASDRRSKTTHLHKTGLGYMLAGEKQVTPDELLSVVETFAKNCNDVDVC
AAPVPTDDVYTTPTPPLVGPALRPLNTLAANWWIASYSALAIADGNVLMGAEPGANLEPA
TALEANFQEAGEAEALPAGTGIHGFPRGAGPGTFLHGLFEWAGREGFAKAAGDPITLHNT
VARRCNLRDWETWIEPLSAWLGSYLNAALRFNGTQCKLSTLSTYQVEMEFWFSSRSVNVQ
RLDALVRQHTLGGAPRPVLAPNELNGMFKGFIDLTFEHQGRYYVADYKSNWLGSNDQAYD
AEAMIETMLDKRYDLQLCLYLLALHRQLKLRLAEYDYEQHMGGAVYLFVRGHQAPTHGVH
FERPPRQLIEQLDQLFMGQHAEASA
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagttaatctcaatcccctggactttccattgcatggcagccgattgatcgag
gccagtgccggcacgggcaaaaccttcacaatcgctttgctttatgtgcgtctggtgctg
gggcatggtggcgaaaacgcattcaagacaccgcttacaccgccgcaaatcctggtggtg
acctttacggacgcggctacccaggagctgcgcgaccgtattcgtgcacggttgactgaa
gcggcacagtgctttctggagccggatcgcaaacatgacaagttgctgcagcaactgcgt
gacgaatgcccatcggagcaatggcccgactgcgcaagacgattgcaattggccggagag
tggatggatgaggccgcggtctcgactattcacggctggtgttatcggatgctgcgtgag
catgccttcgacagtggcagtctatttacccagacgctagaaactgaccagagcgagttg
ctggccgaagtggtccgggattattggcgtcggcatttctatgagttgccggtggaacag
gcacgtgcgatcggtgattgtttcaaaagccctcaggagttgggggatgcgctcggttcg
ttgctgacacgccaggacgcgacctatcaatacaaagcccagcctcttgaagcccctggg
tctttgcaggcattactccaggaaccgggtgaatggtacgcaacagtcggcgaactggag
cgtaatgctcgccagttgtggcagcagcatcaggtcgaggtagaggccttactgcaaagt
gttcgggcccggatgcatggaggtacctataaaaatgcaggccaggatgatgtattcaat
ggctacttgcgcgacttggaacagtggagccggggacaacctgcacctgaaaaaataaaa
gcattcagtcaatccggcttgaggctcactggtaaagacaaggttccccaacatgaggtt
ctacaggccattgatgcctggctggaaaaacgtaacgccaaggttgatatcaaggcgcag
gtgctgctgcatgccttgcatgaagtgcatgagcgctttgacgaagaaaagcgacgtcga
gctgaaatcggattcgacgacctgctcaatcgccttgaccacgccctgcagagctcgtcc
ggccctcgtctggccgagaccattcgcaagcagtacccggttgccttgatcgatgagttc
caggacaccgacccggttcaataccggatctttgaaaccatctaccgcatcagcgagaac
ctggatgactgcgggctgttcctgatcggcgatccaaaacaggcgatttactccttccgt
ggcgcggatatttacacttatctgcaggcgcgaggggccacggctggccgtcattacacg
ctgggcaccaattatcgttccacccaggcgatggtcgatgcagccaaccactgcttcgag
ttcgccgaattacagccgcgtggagcgtttcgttttgccaaggaagaccagggcaatccg
gtgccgttcaacaccgtgcaagccaacgggcgcgacgatattttgcagatcaacggcacg
gatcaaccggccctgacgttctggcatctggaaacgccgggcgtaatcaataacgccacg
tacttgcgcaaagccgctgaagcctcggcatcggcaattcaggcctggctcgatccagct
gcaatcaaacggtccggtttactgagcaataagggtgaattcgtcgccttgcggcccgcc
gatatcgccattctggtacgcaatcgcaaggaggcagaagccatccgcaaagccctggcg
cagcgccaattggccagtgtctatctctccgacagggactcggtcttcgaaagcgatgag
gccaaagacctgctgtatatcctgcgagcgtgcgctcaaccgaccagcgatcggctagtg
cgagcggcgatggcgacccgtagcgtcgggctgccatggcagacgctggagcaattgaac
caggatgagttgttctgggagcaacaggtgctgttgttcagggatttgcgtgtcatgtgg
cagcaacaaggtgttctgccaatgctgcgaaagctgctggccacgttcaaggtaccggcc
cgtttgcttctcgaggatcaaggtgagcgtcgcctgaccaacctgttgcacctggccgaa
tggctgcagcgcagcgctgccgaactcgatggcgagcatgcgttgatccgccacctggcc
gagcaggtcgatggtcagagcgaagaagaaatcctgcgactagaaagcgattcggacctg
atcaaggtgatcaccgtgcacaagtccaaaggcctggaataccccttggtgctgctgccg
tttgcctgcagcgcaagggagatcgatggcaaaagcaaaaccccgccaatgtttcacgat
gaaaatgattcgttggtgattgaattggtaaaaggtgattcggcaaaacctgcacaagtt
cgggctaacgatgagcgtatgggagaggagatgcgattgctctacgtcgccttgactcga
gctcgttatgccacctggatttgcatggcagcccaagcatcggatcgcagaagtaaaacg
acgcacttgcacaaaacaggcctgggttacatgttggcaggtgagaagcaagtcactccc
gatgagcttctcagcgtggtcgagacttttgcaaaaaactgcaatgacgtagacgtgtgc
gcggcccccgtgccgaccgacgatgtgtatacgacgccgacaccaccgctggtggggccg
gcattgcgtcccctgaacacgctcgcggcgaactggtggattgccagttactcggcgtta
gccattgccgacggtaatgtcctgatgggggcggaaccgggagccaatcttgagccggcg
actgcgctggaagccaattttcaggaagcaggtgaagctgaagccttgcctgcagggacc
gggattcacggtttccctcggggcgcaggaccgggcacctttctgcacgggctgttcgaa
tgggccgggcgcgaaggtttcgccaaggctgctggagatccgatcaccctgcataacacc
gttgcccgacgctgcaacctgcgtgattgggaaacctggatcgagccactttccgcttgg
cttggcagctatctgaatgcggcactgcgattcaacggtacccagtgcaaactctcgact
ctgagcacctatcaagtagagatggagttctggttttccagccgctccgtgaacgttcag
cgtcttgatgccctggtgcgccaacatacattgggtggtgcaccgcgccctgtgctggcg
cccaatgagttgaacggcatgttcaaaggcttcatcgacctgacgtttgaacatcagggt
cgctactacgtggcggactacaaatccaactggctgggcagcaacgaccaggcctacgac
gccgaagcgatgatcgagacgatgctggacaagcgttacgacctgcaactgtgcctgtac
ctgctggccttgcatcgccaactcaagctgcgccttgcggagtatgactacgaacagcac
atgggcggggcggtgtacctgttcgtccgtgggcaccaggcgcccacccatggcgtgcat
ttcgaaaggccgccacggcagttgattgaacagcttgaccaactcttcatggggcaacac
gcggaggccagcgcatga
DBGET
integrated database retrieval system