Pseudomonas moorei: PMm318_A23830
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Entry
PMm318_A23830 CDS
T11016
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmor Pseudomonas moorei
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmor03009
]
PMm318_A23830 (rimO)
Enzymes [BR:
pmor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PMm318_A23830 (rimO)
Ribosome biogenesis [BR:
pmor03009
]
Prokaryotic type
ribosomal protein modification factors
PMm318_A23830 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
BFT61624
LinkDB
All DBs
Position
complement(2618809..2620146)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDEVK
QDRWERFMAHQQAISSARLQLRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggcttcgtatccctgggttgcccg
aaagcactggtcgactccgagcgcatcctcacccaactgcggatggaaggctatgacgtc
gtgtccacttatcaggacgctgacgtagtggtggtcaacacctgcggcttcatcgattcg
gccaaggcggaatccctggaagtaatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacatccgcaacgtgcacccgagcgtgctg
gccgtgactggcccgcagcagtacgagcaagtggtcaacgccgtgcatgaagtcgtgccg
ccgcgtcaggatcacaacccgctgatcgacctggtgccgccacaaggcatcaaactgacc
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccatagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccggtcggtgacgtgctcgacgag
gcccagcgcctggtcaaatccggcgtaaaagagctgttggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggcttctggaacggcgcgccagtgaaaacc
cgcatgacagaactctgcgaggccctcagcaccctgggcgtctgggttcgtctgcactac
gtctacccgtatccgcacgttgacgaactgatcccgctgatggccgccggcaagatcctt
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggcgatgaaacgc
ccggccttcgaagacaagaccctggcgcgcatcaagaactggcgcgaaatctgcccggac
ctgattatccgttcgaccttcatcgtcggcttcccgggcgaaaccgaggaagacttccag
tacctgctgaactggctgaccgaagcgcaactcgaccgcgtcggctgcttccagtattcg
ccggttgaaggcgctccagccaacgacctggatctggaagtcgttccggacgaggtcaaa
caggaccgctgggagcgcttcatggcgcaccagcaggcgatcagctcggcgcgcctgcaa
ctgcgcatcggccgtgaaatcgaagtgctggtcgatgaagtcgacgagcaaggcgccgtt
ggccgttgcttcttcgatgccccggaaattgacggcaacgtgttcatcgacaatggcagc
aacttgaagccgggcgacaaggtctggtgcaaagtgaccgacgccgacgaatacgatctg
tgggctgaacagatctaa
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