Pseudomonas moorei: PMm318_A29980
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Entry
PMm318_A29980 CDS
T11016
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmor Pseudomonas moorei
Pathway
pmor00071
Fatty acid degradation
pmor00280
Valine, leucine and isoleucine degradation
pmor00310
Lysine degradation
pmor00362
Benzoate degradation
pmor00380
Tryptophan metabolism
pmor00410
beta-Alanine metabolism
pmor00640
Propanoate metabolism
pmor00650
Butanoate metabolism
pmor00907
Pinene, camphor and geraniol degradation
pmor00930
Caprolactam degradation
pmor01100
Metabolic pathways
pmor01110
Biosynthesis of secondary metabolites
pmor01120
Microbial metabolism in diverse environments
pmor01200
Carbon metabolism
pmor01212
Fatty acid metabolism
Module
pmor_M00087
beta-Oxidation
pmor_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PMm318_A29980 (fadB)
00650 Butanoate metabolism
PMm318_A29980 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PMm318_A29980 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PMm318_A29980 (fadB)
00310 Lysine degradation
PMm318_A29980 (fadB)
00380 Tryptophan metabolism
PMm318_A29980 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PMm318_A29980 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PMm318_A29980 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PMm318_A29980 (fadB)
00930 Caprolactam degradation
PMm318_A29980 (fadB)
Enzymes [BR:
pmor01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PMm318_A29980 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PMm318_A29980 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PMm318_A29980 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PMm318_A29980 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BFT62239
LinkDB
All DBs
Position
3264829..3266976
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELTFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLREAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVEKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTEKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
acgttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtcttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgcagagcttgttgctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgacagtcgccgcgatcaatggcatcgctctgggtggcggtctggaa
atgtgtctggcagcggactaccgcgtcatgtccaccaaggccaagatcggtctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgtctgccgcgcctgatcggc
gccgacaacgccatcgaatggattgccgccggtaaggaaaaccgcccggaagacgcgctg
aaagtcggcgccgtcgatgccgtggtggctcctgaaaagctacgggaggctgcgctggaa
ctgatcaagcgcgctatttccggcgagttcgattacaaggccaagcgccagccgaagctg
gaaaaactgaagctgaacgcgatcgagcaaatgatggctttcgaaaccgccaaaggtttc
gtggccggccaggctggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggcgctggaagtcgaagccgccggcttcgtgaag
ctggccaagacctctgctgcgcagagcttgatcggcctgttcctgaatgatcaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactc
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcttccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcaggggctggccgaagctgccaagctg
ctggtgggccgcgttgagaaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgacttcggtcacgttgacctggtggttgaagcg
gtcgtcgagaacccgaaggtcaagcaggccgttctggccgaagtcgaaggccaggtcaaa
gaggacaccatcctcgcctcgaacacctcgaccatttccatcagcctgttggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtcgaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgattgtggtcaacgactgcccgggcttcctggtc
aaccgcgttctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggcccatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggccgaaggtttc
cctgatcgcatgaaagacgaccgtcgttcggccgttgacgtgctttacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaggtggccgatccgtcggtcctggaagtgctcaagccaatcgtgtttgaacagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gagaagctgcgcgaaatggccaaaaacggccagagcttcttcggttaa
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