Pseudomonas soli: O165_003190
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Entry
O165_003190 CDS
T03276
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pmos
Pseudomonas soli
Pathway
pmos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O165_003190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_003190
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O165_003190
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O165_003190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UB2H
Flavi_DEAD
AAA_30
AAA_22
NPHP3_N
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIN57353
LinkDB
All DBs
Position
637145..639121
Genome browser
AA seq
658 aa
AA seq
DB search
MSTGMFILHSNYTPAGDQPEAIARLLSDIEDGATHQTLKGITGSGKTFTMANVIHRLKRP
TLILAPNKTLTAQLYGEMKHFFPENAVEYFVSYYDYFQPEIYMPGTDRFIPKDSAINDHL
ERLRLSTTKSLIERRDVIVVASVSSIYGLGDPDAYRALQIALSPGVKLNQRELIRRLALL
QYDRTERTLKRATFRVQGDVIDIFPADSEYRAVRVELLDDTVASVQWMDPVTGKTLGEID
HYLVSPKTLFAPPTNKIDSASKKILADMEERVAELNRNNRLVEANRLYERITHDVEMMRE
VGYCSGMENYSCYFSDRDAASPPITLLDYLPKDGLLFVDESHVMVPQISAMYRGDQARKD
TLIDYGFRLPSSKNNRPLNFDEFEKVKPQTIFVSATPGDYELRVSKGRVVEQVIRPTGLL
DPKVEVRKADGYIDDLLAEISKCVKRKNRVLVTTLTKVSAEELTDFLTDNGIRARYMHSD
IKAEDRVEIINGLRAGEFDVLIGISLLREGLDIPEASLVAILDADRAGFLRSAHALIQMI
GRVARNENGKAILYADAVTPAMKQAIDETNRRRQLQIAFNEENGISPASSVRKLAGEETN
TEEPTVHSEAFCENLSDLCDQITAKEQQLLEFTDTGDEQRVEDIRRQLDGLYRQFIYI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccggtatgtttattctgcactccaactatacgccggcgggggaccagccagag
gcgatagcgcgcctgctgtcggacatagaagacggtgcgacgcaccagacgctgaaaggt
atcaccggctcaggtaagaccttcaccatggccaatgtgattcatcgtctgaagcggcct
acgttgatcttggctcctaacaagacgttgaccgcgcagctttatggtgaaatgaagcac
ttctttcctgagaacgcggtcgagtacttcgtttcctactacgattattttcagcccgaa
atctatatgccgggcaccgatcgtttcattccaaaggactcggccatcaatgaccacctt
gagcgcctgcgcctgtccacgaccaaatccttgattgagcgtcgtgacgtgatcgtcgtc
gcttcggtgtcttcaatctacggcctgggtgatccagatgcataccgagcgctacagatc
gctctgtcccctggggtcaaactaaaccagagagagctaattcgtcgcttggctttgctg
caatatgatcgcacggagcgcactctcaagcgtgcaacgttccgcgtccaaggtgatgtg
attgacattttccccgctgattccgagtacagggcggttcgggtggaactgttggatgac
actgttgcgtctgtccaatggatggaccctgttaccggcaagacgttgggagagatagac
cattatttggtttcgccaaaaacgcttttcgcaccgcccacgaacaaaatagattccgcg
tccaaaaagatactcgctgatatggaagagcgggttgccgagctgaacaggaataatcgc
ttggtcgaggcaaacaggctgtacgagcggatcacgcatgacgtggaaatgatgcgcgag
gtcggctattgctcggggatggagaattattcctgctacttcagcgaccgagacgcagct
tctcctccgatcacgttgctggattatttgccgaaagacgggctgctgttcgtcgatgaa
tctcatgtcatggtgccacagatatccgcaatgtaccggggggatcaggcgcgcaaggac
acgctgatcgattacgggttccgtttgccttcatcgaagaacaaccggccattgaacttt
gacgagttcgagaaggtcaagcctcagaccatctttgtttccgctactccgggcgactac
gagctgagggtgtcgaaaggcagggttgtcgaacaggttatcaggccaacgggactgctt
gaccccaaggttgaagtgcggaaagcggatggatacatagatgacctgcttgccgaaata
tcgaagtgcgtgaagagaaagaatcgagtgcttgtgactacgctgacgaaggtcagtgca
gaagagctaacggatttcttgacggacaacgggattcgagcgcgctacatgcattcggac
ataaaagcggaggatcgtgttgagatcatcaatggcctgcgcgcaggagagttcgatgtt
ttgattgggattagtcttttgcgcgaagggctggatattccagaggcatcattggttgcc
attctcgatgcagaccgtgcagggttcttgcgttcggcccatgcgctcattcagatgatc
ggtcgagtcgctcggaatgaaaacggcaaggcgatcttgtacgccgacgcggtgacgccg
gcgatgaagcaggcgatcgatgagaccaataggcgcaggcagcttcaaattgcctttaac
gaggaaaatgggatttctccagcctcgtctgtgcgaaaactagcaggggaagagacgaat
acggaggagcccaccgttcattccgaggctttctgcgagaacttgtccgacctttgcgat
cagatcactgccaaggaacagcagctactcgaatttaccgataccggtgacgagcagcgc
gtcgaagacattcgtcgtcagttggatgggttgtaccggcaattcatttacatctaa
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