Pseudomonas soli: O165_006290
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Entry
O165_006290 CDS
T03276
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pmos
Pseudomonas soli
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmos03016
]
O165_006290
Enzymes [BR:
pmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
O165_006290
Transfer RNA biogenesis [BR:
pmos03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
O165_006290
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
AIN57925
UniProt:
A0AAJ5SRL4
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All DBs
Position
1267103..1267648
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AA seq
181 aa
AA seq
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MIQDVRPSGAPFKRLFFALSLGEEQRRGISQWRRGLGLRSGKPVPSENFHVTLLFLGDVD
AAQVPAVCAVVDALRLPEAKLRLVLDQLQVWPRASALVLAPAQAPLALRQLVYDLQQALL
PLGIEPSVREYRPHLTLSRDFREPLPEAGEAPAFHLVARHFTLYESRKGRYWPLAEWSLT
Q
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggatgtacgccccagcggggctcccttcaagcggctgtttttcgccctgtca
ctgggcgaagaacagcgccgtggcatcagccagtggcggcgtggcctgggcttgcgcagc
ggcaagccggtgccgagcgagaacttccatgtcaccttgctgttcctgggcgatgtcgat
gccgcccaggtgccggcggtgtgcgccgtagtggatgcactgcggcttcctgaagccaag
ctgcgcctggttctggaccagttgcaggtatggccgcgggcttcggcgttggtgctggcg
ccggcgcaggcgccgttggccctgcgccagctggtgtacgacttgcagcaggcgctgctg
ccgctgggcatcgagccgtcggtgcgtgagtaccggccgcacctgaccctgtcccgggat
tttcgcgaaccattgccggaggcgggcgaggcgccggcgttccacctcgtcgcccgccac
ttcaccctgtacgagtcacgcaagggccgctactggcctttggccgagtggtccctgacg
cagtga
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