Pseudomonas soli: O165_014920
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Entry
O165_014920 CDS
T03276
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmos
Pseudomonas soli
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_014920
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O165_014920
Archaeal homologous recombinant proteins
O165_014920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIN59508
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All DBs
Position
3146522..3147760
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AA seq
412 aa
AA seq
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MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVGAWCLALPFLRPAEVTGPALGDDYLQGITHVHEQLIAAAQKKRKKD
QALVAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAISYVALGHLHKPQKVNREDR
IRYSGAPIPLSFAEINYPHQVLEVELEGAELVSVEPRPVPRAVALQRVGPAPLGELLEQL
GQLPVIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRISAEYAGAGRQE
EDEQTFVELAQLTPQDLFGRAWQQQYGNPADEQALADFAELLQDVLQEEERP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctgcatggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctaggccagctgcgcctgcgccagccc
gatgcgctgctgatcgccggcgacatcttcgacaccgtcaatccgccggtcaaagcccag
gaacgcctttacgacttcatcgtccaggcccacgagcaacagcccaagctggacatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgagctgccggcgccactgatgcgc
cgcctgcgcacccacgccctgggccgcgtgcactggctcgacgagggccagctggacgcc
gagcgcctgctgatcccgctgaccaacgcccgcggcaaggtcggcgcctggtgcctggcc
ctgcccttcctgcgccccgccgaagtcaccgggccggcgctgggtgacgactacctgcag
ggcatcacccacgtccacgagcagttgatcgcggcagcgcagaagaaacgcaagaaggat
caggcgctggtcgccatcagccatgcgcacatggccggcggcagcatctcggaagactcc
gaacgcagcctgatcatcggcaatgccgaggcgctgccggcgcggctgttcgacaaggcc
atcagctatgtcgccctgggtcatctgcacaagccgcagaaggtcaaccgcgaggatcgc
atccgctacagcggcgcgccgatcccgctgtccttcgctgaaatcaactacccgcaccag
gtgctggaagtggagctggagggcgccgaactggtcagcgtcgagccgcgcccggtgccg
cgtgccgtggccctgcagcgggtcggcccggcaccgctgggcgagttgctcgaacaattg
ggccaattgccggtgatcgacctgctcgaagaccccaaccgccaaccctggctggaggtg
cgggtacgcctggacgagccgcagcccgacctgcgccagcagatcgagaccgccctgcaa
ggcaaggctgtgcgcctggtgcgcatcagcgccgagtatgccggcgccgggcgccaggag
gaggatgaacaaacctttgtcgaactggcgcagctgaccccgcaggacctgttcggccgt
gcctggcaacaacagtacggcaaccctgccgacgagcaggccctggccgactttgccgag
ctgctgcaggacgtgctgcaagaggaggaacgaccatga
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