Pseudomonas soli: O165_016700
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Entry
O165_016700 CDS
T03276
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmos
Pseudomonas soli
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmos03021
]
O165_016700
Transcription machinery [BR:
pmos03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
O165_016700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF6231
Motif
Other DBs
NCBI-ProteinID:
AIN59836
LinkDB
All DBs
Position
3523469..3526315
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DLITHFEGWKLTVQEVEDIDGLMVYHGIDPQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMLSTLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASPEYSLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLEE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEAYADLPSGERAELYPEVAFQAQGEAGDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLVCSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLQQLAGGDDKGWTQLVGEARAERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLGPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAKRIAAGEAKVLPTHDERVAQARQRLAAEADEEL
ARLTALKAVNPSVRDSEIDALRKQREEGLAALEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaggccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacgggc
gacacccgccagtactcgctacgcaatgcgccgctgacccgcgtgcgtttctcgccaggc
gacctgatcacccatttcgaaggctggaagctcaccgtgcaggaggtcgaggacatcgac
ggcctgatggtctaccacggcatcgacccgcagaaccagccgcgcacactgcccgagacg
caactgtccaacttcattcagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctgtcgtggttctccctgcgctacaacaccctgcagcacaccagcaagcagatg
ctctccacgctgtggggcctgggtggcgtgcgcgcccaacctatcgcccaccagttgcac
atcgcccgtgaagtggccgaccgcatcgctccccgcgtactgctggcagacgaagtgggc
ctgggcaagaccatcgaggccggcctggtcatccaccgccagctgctgtccggtcgcgcc
agtcgcgtactgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggttgcgctgttcgacgccgagcgcttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggtggcgctggagtggctggtcgaggac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgatgaggcc
caccacctggtctggcacgaagagcaggccagccccgaatactcgctggtcgagcagctg
gcccaggtgattcccggcgtgctgctgctcaccgccacgcctgaacagctcggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgcttccacgacctggccgccttc
cgcgccgaaagcgagcactatcgcccggtggccgaagccgtacaggagctgctcgaggaa
ggccgtctgtcgccgaaagctcacgccaccattcagggcttcctcggcgccgaaggcgaa
gcactgctggccgcagtcagcgatggcgacagccaggccagcgcgcgcctgatccgcgaa
ctgctcgaccgccacggtaccggccgcgttctgttccgcaacacccgtgcggcgatccag
ggcttccccgagcgccaactgcacccctacccgctggccaaccccgaggcctacgccgac
ctgccttcgggcgagcgcgccgagctgtacccggaagtggccttccaggcccagggcgaa
gccggcgacgacgagcgctggtggcgtttcgaccctcgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgagcatcctcgagcgcgaccgcgccgccgcctacttcgccgacgaagagttcggcgcc
caggtgctggtgtgttccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccggcccacccggacctgctcgagcaacgcatcggccgcctc
gaccggatcggccagaagcacacgatccaactgcacatcccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgcccg
accggcaacgccctgcaacatcagttcggcccgcgcctgctgcaacagctggccggtggc
gacgacaaaggctggacccagctggtcggcgaggcccgcgccgaacgcgagcgcctggag
gccgagctgcacaccggtcgcgaccgcctgctggagctcaactccggtggcgcaggcgaa
ggccaggcgctggtcgaggcaatccttgagcaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcctttggtatcgacagcgaggaccactcggaaaacgccctg
atcctcaagccaagcgagaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacttacgaccgcggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtccagggtggcatggacctggtgttgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcccggtaccgtgctgctcgaactg
ctctatgtcagcgaagtggtggcaccgcgcagcctgcagctggggcgctacctgccgccg
gccgcgctgcgctgcctgctcgacaccaacggcaacgacctgggtccgcgggtggccttc
gaaaccctcaacgaccagcttgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgcgacgtgctggccaaacgcatcgccgcgggcgaggccaaggtcctgccaacc
cacgacgagcgcgtggcccaggcccgccaacgcctcgccgccgaagccgacgaggagctg
gcgcgcctgactgcgttgaaggccgtcaacccgagcgtgcgcgacagcgagatcgacgcc
ctgcgcaagcagcgcgaagagggcctggcggcgctggaaaaagcggcactgcgcctcgag
gcaatccgggtgctcgtcgccggttga
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integrated database retrieval system
