Pseudomonas soli: O165_017525
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Entry
O165_017525 CDS
T03276
Name
(GenBank) type IV secretion protein Rhs
Organism
pmos
Pseudomonas soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
DUF4595
Beta-prop_WDR19_1st
DUF4550
Motif
Other DBs
NCBI-ProteinID:
AIN59998
LinkDB
All DBs
Position
complement(3710629..3714948)
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AA seq
1439 aa
AA seq
DB search
MSDALWAAREGDALMHTSMMADIVSGVLEVAANVAIGMLATAAVTAALGLTVVTGGLGCF
VLGAVVGIVVGVVMSKTGADKGLSSLCEGIGNFLFPPSVQANILTGSKNTHTNGKPAARA
AGVIVAAAAPAGSDAAQSPAEEEEESFLDMAKGFFSQMWRPTVASPAPNTEPADDDKILC
SKHPPMPPQYLAEGSSKVTINGHPACRSGDRSTCEAVIVDAGLVSDNVRIGGDSIVVREI
RSGKTPGIGLAITALMMLRGRGGKFYSKFGCMLIGGIGSAVTSQVTGAITSAIAGSPNPV
HSSTGAKLLSGEAELDFSLPGLIPLDWQRYYNSRDERRDGLFGAGWSVDYEVSVAIEAHP
EGGEHLLFTDEQARVVDMGHIPRGDAVFSAGEGLSVRRAHNGELLIESVDGLYRLFQPTP
NNPQRLRLAQLGDRNDNRIYLDYDSNGRLLRLRDTFDVVQVQLVYSSQWPARVSHIERWY
SDESNELLVSYAYDSNGDLAEVRDASGQVQRRFAYDQGRRMVEHQLPSGLRCFYEWTRAV
DDWRVARHWTDDGDEYRFDYDIEAGITRVTDGLQRVSTRYWNPQYQITQYTDALGHTWRF
EWNDERQLLGATDPQGGQWQYLYDESGNLCESIDPLGRSEATQWLEHWSLPRVQTDKAGK
RWRYRYDQRGNCSSETDPLGRTTRYRHDERGQVVEIIDAAGKHKHLRWNELGLLIEQVDC
SGYPTRFSYDRRGHLQAVTDALGERTEYQYDAQGRLLGSQLPDGRSEHYQLDRNGQLNSY
TDPAGHSTQYRYNRRGQVQQRIDPHGRRVQFSYDAYGRLLALTNENSESYRFSWDLADRL
TEQQDLDGSASRYHYDRLDNLSCVEYLPAPQGDAEAIIHQLHRDAVGRLIKKRTDDGETR
YSYDPLDQLTAISFTDKAGNSEQLAFTYDALGQLLEEHSASGVLQHHYDELGNLIQTQLP
DGRWLNRLYYGSGHLHQLNLDGKVISDFERDRLHREVLRTQGRVSTRSEYDRSGRLRSRL
RRPNHQPPQLPATVQQRFDFDSADNLIGRFNQQPGSQHQQLLHYDASGRIMASQDAGQGQ
SETFAYDAAANLLDGPQAGIGLVRHNRLLTYQDKRYRYDGFGRLIEKRSSRRGIQHFSYD
AEHRLIQVRSQHGGRERILNMRYDPLGRRVEKSEYDDQGNLLDQTRFAWDGLRLLQEHRY
SQTSLYLYVEDSHEPLARVDGTGQHQQVRYYHTDLNGLPEQLTDDSGEAVWQARYQVWGN
TLQEVREAHFIEEQNLRFQGQYLDRETGLHYNTFRFYDPDIGRFIQTDPISLAGGINLYQ
YSANPFDWIDPLGLSCGPRRTRHVPNRHVRRHNDVGKSKFTPAEHRKLQAKSKYRKPSQY
KKLEDRTMKQPTRVIRQNDGRIRYERDYGRVIGTRGEKGHVTIYDPVKDKVVTSYPSHF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccctgtgggccgcccgcgagggcgatgcgctgatgcacacctcgatgatg
gccgacatcgtcagtggcgtgctggaagtggccgccaacgtcgccatcggcatgctggcc
accgcggcggtaaccgcggcgctgggcctgaccgtggtcaccggcggcctcggctgcttc
gtgctcggcgcggtggtgggcatcgtggtcggcgtggtcatgagcaagaccggggccgac
aagggcttgagcagtttatgcgagggcatcggcaacttcctgttcccgccctcggtgcaa
gccaacatcctcaccggctcgaagaatacccacaccaatggcaaaccggccgcacgcgct
gccggcgtcatcgttgccgccgctgcgcccgccggcagcgacgcggctcagtcgccggcc
gaggaggaggaagaaagcttcctcgacatggccaagggatttttttcgcagatgtggcgg
cctacggtcgccagcccggcgccgaacaccgagcctgccgacgacgacaagatcctctgc
agcaagcatccgccgatgccgccgcagtacctggccgaaggctcgagcaaggtcaccatc
aacggtcacccggcctgtcgcagcggcgatcgcagcacctgcgaggcggtgatcgtcgac
gccgggctggtctccgataatgtgcgtatcggcggcgactcgatcgtggtccgcgagatt
cgcagcggcaagaccccgggcatcggcctggcgattaccgccttgatgatgctgcgcggg
cgcggcggcaagttctacagcaagttcggctgcatgttgattggcggcatcggcagcgcc
gtcaccagccaggttaccggcgctatcaccagcgccatcgctggctcacccaacccggtc
cacagctccactggcgccaaactgttgagcggcgaagccgagcttgatttcagccttccg
ggcttgatcccgttggactggcagcgctactacaacagccgggatgaacgccgcgacggc
ctgttcggtgctggctggagcgtcgattacgaagtctccgtcgctatcgaagcgcatcct
gaaggcggcgagcacctgctgttcaccgatgagcaggcacgggtcgtcgacatgggccat
atccctcgtggtgatgccgtgttcagcgccggcgaaggcctcagcgtgcgtcgcgcgcac
aatggcgaactgctgatcgaaagcgtcgacggtctctatcgtctgttccagcccaccccg
aacaatccgcagcgcctgcgcctggcgcaactgggtgaccgcaacgacaaccgcatctac
ctggactacgacagcaacggccgcttgctcaggctgcgcgatacctttgatgtggtccag
gtgcagttggtttacagcagccaatggccagcccgggtcagccatatcgagcgatggtac
agcgacgagtcgaacgagctgctggtcagctatgcctatgacagcaacggcgacttggcc
gaagtccgcgacgccagcggccaggtgcagcggcgctttgcctatgaccagggccggcgc
atggtcgaacaccagctgcccagcggcctgcgttgcttctatgaatggactcgtgccgta
gacgactggcgcgtggcccggcactggaccgacgacggtgacgagtaccgtttcgactac
gacatcgaagctggcatcacccgggtcaccgacggtttgcagcgggtcagcacacgctac
tggaacccgcagtaccagatcacccagtacaccgatgccctcggccacacctggcgtttc
gagtggaacgacgaacgccagctgctgggcgccaccgacccgcagggtgggcaatggcaa
tatctgtacgatgagtccggcaacctctgcgaaagcatcgatccactgggccgcagcgag
gcgacccagtggctggagcactggtcactgccccgggtacagaccgacaaggccggcaag
cgctggcgctatcgctacgaccagcgcggcaactgcagcagcgaaaccgatccgctgggc
cgcaccacccgctaccgccatgacgaacgcggccaggtggtggagatcatcgatgcggcg
ggcaagcacaagcacctgcgctggaacgaattgggcctgctgatcgagcaggtcgattgt
tcggggtacccgacccgcttcagctatgaccggcgcgggcatctgcaggcggtcaccgat
gccctcggcgaacgtaccgagtaccagtacgatgcccagggccgattgctcggctcgcaa
ttgcccgatgggcgcagtgagcactatcagcttgatcgcaacggccagctcaacagctat
accgaccctgccgggcactccacccaataccgctataaccggcgtggccaggtgcagcag
cgtatcgatccgcatggtcggcgggtgcagttcagttacgacgcctacgggcggctgctg
gcgctgaccaatgaaaatagcgaaagctacaggttcagctgggacctggctgatcgcctg
actgaacagcaggatcttgacggcagcgccagccgctatcactacgaccggctggataat
ctcagttgcgttgagtacctccccgccccccaaggcgatgctgaagcgatcattcatcaa
ttgcaccgggatgccgtcgggcgcttgatcaaaaagcgcaccgacgatggtgaaacccgg
tacagctacgatccccttgatcaactgacggcaatcagcttcaccgacaaggcaggcaac
agcgagcaactggccttcacttacgatgcccttggccaattgctggaagagcacagcgcc
agtggtgtgctgcaacatcactacgacgaactcggcaacctgatccagacccagctgccc
gacggccgctggctcaaccgcctgtactacggcagcggccatctgcaccagctcaacctc
gacggcaaggtgatcagcgatttcgaacgcgaccgcctgcaccgtgaagtgctgcgcacc
cagggccgggtcagcacccgcagcgagtacgaccgcagcggtcgtttgcgctcacgcctg
cgccgccccaaccaccagccgccgcaactgccggctacggtacagcaacgcttcgatttc
gactcggcagacaacctgatcggccgtttcaaccagcagcccggcagccagcaccagcaa
ttgctgcactacgatgccagcggccggatcatggccagccaggacgctggccagggccag
agcgaaaccttcgcctacgacgccgccgccaacctgctcgatgggccgcaagccggcatc
ggcctggtgcgccataaccgcttgctcacctaccaggacaaacgctaccgctacgacggc
ttcggccgcctgatcgagaaacgcagcagccggcgtggcattcaacatttcagctacgac
gccgagcaccgcctgatccaggtgcgcagccagcacggtgggcgcgaacggatactgaac
atgcgctacgacccgctcgggcggcgtgtcgagaaaagcgaatatgacgatcagggcaat
ctgctcgaccagacccgcttcgcctgggatggcctgcgcttgctgcaggagcatcgctac
agccagaccagcctgtatctgtatgtggaagacagtcacgaacctttggctcgggttgac
ggtacagggcagcaccagcaggtgcgctactaccataccgatctcaatggcctgcccgaa
cagttgacggatgacagtggcgaagcggtctggcaggcacgctatcaggtctggggcaat
accctgcaggaagtgcgtgaggcgcatttcatcgaagagcagaacctgaggtttcagggc
cagtacctggatcgtgagactggtctgcactacaacacgtttcggttttatgatccggat
atcggacgctttatccagacagacccgatcagtctggccggtggtataaacctctatcag
tacagtgcgaatccgtttgattggatcgatccactggggctctcctgtggacctagaagg
acccggcacgttccgaatcgccacgtccggcggcacaatgatgtaggcaaaagtaaattc
acgcctgcggaacatagaaagctacaggcaaaaagcaaatacagaaagccgagtcagtac
aagaagctagaggacagaaccatgaaacaacccaccagagttattcgtcagaatgatggt
cgaattcgttatgagcgtgattatggtagggtgatcggtacacggggtgagaaaggtcat
gtcacaatctatgaccctgtgaaggataaggtagtaacatcttacccctctcatttttaa
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