Pseudomonas soli: O165_019670
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Entry
O165_019670 CDS
T03276
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O165_019670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmos03019
]
O165_019670
03016 Transfer RNA biogenesis [BR:
pmos03016
]
O165_019670
Enzymes [BR:
pmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
O165_019670
Messenger RNA biogenesis [BR:
pmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
O165_019670
Transfer RNA biogenesis [BR:
pmos03016
]
Prokaryotic type
tRNA degradation factors
O165_019670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AIN60395
UniProt:
A0A1H9S3T8
LinkDB
All DBs
Position
complement(4174329..4176434)
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AA seq
701 aa
AA seq
DB search
MNPVIKQFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKHADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTESAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVKELAAEAAKPTWDWKPAVAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAIAKFSGEEGQPSAGEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGESRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagcaattccagttcggtcaatcgaccgttaccctcgaaacgggc
cgcattgcccgtcaggccaccggcgccgtgctggtcaccgtcgacaacgatgtcactgtg
ctggtgaccgtggtcggtgccaagcatgccgatccgagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgccgctggcaagatcccaggtggtttcttcaagcgt
gaaggccgcccatccgaaaaagaaaccctgacttcgcgcctgatcgaccgcccgatccgc
ccgctgttccctgaaggtttcatgaacgaagtgcaggttgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggcattccgttcgaaggcccgatcggcgccgcccgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtaccgagtcggccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgatgaattccaggccgtgatcaaggctgtc
aaagagctggctgccgaagccgccaagccgacctgggactggaaacctgccgttgccaac
accgaactgttcaacgccatccgcgccgagttcggcgaagcggtgtcgcaaggctacacc
atcaccgtcaaggccgaccgctacgcgcgcctgggcgagctgcgcgatcaggcgatcgcc
aagttctccggtgaagaaggccagccatcggccggtgaagtcaaagacatcttcggcgag
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacaccaagaccgtgcgcccgctgaacatcgaagtcggcgttctgccgaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccctgggtaccgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtaggtgagtgtggtcgcatgggcggtgctggccgtcgt
gaaatcggccacggccgtttggcccgtcgttcggtacaggccatgctgccggccgctgac
gtgttcccgtacactatccgcgtagtatcggaaatcaccgagtccaacggctccagctcc
atggcttcggtctgcggtgcctccctggcgctgatggacgcgggcgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccgtactgacc
gacatcctgggtgacgaagaccacctcggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggcgagtcgcgtaccgagctgtcggccaacgcaccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagccgcggacgctgccaagcagcgcatcctgggcatcaccgccgaggcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggcctggtgcacatctccatgctgagcgatgctcgcgtc
gagaaggtcaccgacgtgctgaaggaaggccaggaagtcgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgctgccaaggcatcgggc
gtctaa
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