Pseudomonas soli: O165_020500
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Entry
O165_020500 CDS
T03276
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pmos
Pseudomonas soli
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmos03009
]
O165_020500
Enzymes [BR:
pmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O165_020500
Ribosome biogenesis [BR:
pmos03009
]
Prokaryotic type
rRNA helicases
O165_020500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AIN60554
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All DBs
Position
4357207..4358592
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AA seq
461 aa
AA seq
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MTVETTAFATLPLSAAMLANLDALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSR
RQTLLFSATYPAGIEQLAKAFMRQPQQVKVEALHSDNQIEQRFIEIDAQQRLDAVTRVLG
HYRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVA
TDVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAISLVAPAEGHRAQAIE
DLQKQPLRWEQLDSLKSKGGEPLLPPMTTLCIAAGRKDKLRPGDILGALTGDAGLPGKQV
GKIAIFDFVAFVAVERAVARQAMLRLNSGKIKGRALKVRIV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttgaaaccaccgcctttgccaccctcccgctgtccgccgccatgctggccaac
ctggacgccctgggctacgcctcgatgaccccgatccaggcccagagcctgccggtgatc
ctcaagggccaggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggctgccaggcgctggtgctg
tgcccgactcgcgagctggccgaccaggtggccaaggagctgcgtcgcctggcccgcgcc
gaggacaacatcaagatcctcaccctgtgcggtggcgtctcgctcggcccgcagatcgcc
tcgctggaacacggcgcgcacatcatcgtcggcaccccggggcgcatccagcagcacctg
gacaaaggcaccctggtgctcgacggactcaacaccttggtgctcgacgaagccgaccgc
atgctcgacatgggcttcttcgacgccatcgccagcatcatcggcaagaccccgtcgcgc
cgccagaccctgctgttctcggccacctacccggccggcatcgagcagttggccaaggcc
ttcatgcgccagccgcagcaggtcaaggtcgaagcgctgcacagcgacaaccagatcgaa
cagcgcttcatcgagatcgacgctcagcagcgcctggacgccgtgacccgtgtactcggc
cactaccgtccacagtcctgcgtggcgttctgcttcaccaagcagcagtgcgaagacgtc
gtcgcccatctgaccgccaagggcatcgtcgcccaggccctgcacggcgacctggagcaa
cgcgaccgtgaccaggtgctgaccatgttcgccaaccgcagcagctcggtgctggtagcc
accgacgtcgccgcccgcggcctggacatcgatggcctggacatggtcatcaacgtcgaa
ctggcgcgtgacgccgagatccacgtgcaccgcgttggccgtaccggccgggccggcgag
aaaggcgtggcgatcagcctggtggcgccggccgagggccaccgcgcccaggccatcgaa
gacctgcagaagcagccgctacgctgggaacagttggacagcctcaaaagcaaaggtggc
gagccgctgctgccaccaatgaccacactgtgcatcgccgccgggcgcaaggacaagctg
cgcccgggtgacattctcggtgcgctgaccggcgacgccgggttgccaggcaagcaggtg
ggcaagattgccatcttcgacttcgtggcgttcgtggccgtggagcgggcagtggccaga
caggccatgctgcgtctgaacagcggcaagatcaagggtcgcgccctgaaagtccgtatc
gtctga
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