KEGG   Pseudomonas soli: O165_022470
Entry
O165_022470       CDS       T03276                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pmos  Pseudomonas soli
Pathway
pmos00300  Lysine biosynthesis
pmos00470  D-Amino acid metabolism
pmos01100  Metabolic pathways
pmos01110  Biosynthesis of secondary metabolites
pmos01120  Microbial metabolism in diverse environments
pmos01230  Biosynthesis of amino acids
Module
pmos_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    O165_022470
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    O165_022470
Enzymes [BR:pmos01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     O165_022470
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AIN60933
LinkDB
Position
4770504..4771751
AA seq 415 aa
MDAFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALHGVDHLVCFAVK
ANSNLGVLNLLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVY
CFNVESTDELERLQMVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLDVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPELADYIKAIRERVGSRDLALVFEPGRYIVANGGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMDVSAVKPREGQGRAYDLVGPICETGDFLGKDRVLDLAEGD
LLAVRSAGAYGFVMSSNYNTRGRGAEVLVDGDQAFEVRRRETVTELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggatgcattcaactaccgcggcggcgagctgttcgcggaaggggtggccctgtcggcg
atcgccgaacgcttcggaacgcccacctacgtgtactcgcgtgcccatatcgaggcgcag
taccgcagctacaccgatgccttgcacggggtggatcacctggtctgcttcgcggtcaag
gccaactccaacctgggcgtgctgaacctgctggcgcgcctgggcgcgggcttcgacatc
gtctccggcggtgaactggaacgcgtgctggccgccggcggccgcgccgatcgcgtggtg
ttctccggggtcggcaagacccgtgaagacatgcgccgcgccctggaagtgggggtgtac
tgcttcaacgtcgagtccaccgacgagctcgagcgcctgcaaatggtggccgccgagatg
ggcaaggtcgcgccggtgtcgctacgcgtgaacccggacgtcgacgccggcacccacccg
tacatctccacgggcctcaaggaaaacaagttcggcatcgccatagccgacgccgaggcc
atctacgtgcgcgccgcgcagttgccgaacctcgacgtggtcggcgtcgactgccatatc
ggctcgcagctgaccaccgtcgagccgttcctcgatgccctcgaccgcctgctggtgctg
gtagaccgcctggccgagtgcggtatccacctgcgtcacctcgacctgggtggcggcgtc
ggcgtgcgctatcgcgacgagcagccgccggagctagccgactacatcaaggccatccgc
gagcgcgtcggcagccgcgacctggccctggtgttcgagccgggccgctacatcgtcgcc
aatggcggcgtgctgctgacccgcgtggaatacctcaagcacaccgagcacaaagacttc
gccatcatcgacgcggccatgaacgacctgatccgcccggccctttaccaggcctggatg
gacgtcagcgcggtcaagccccgcgaaggtcaaggccgggcctacgatctggtcggccct
atctgcgagaccggcgacttcctgggcaaggaccgcgtgctggacctggccgagggcgac
ctgctggccgtgcgctccgcgggcgcctatggtttcgtcatgagctccaactacaacacc
cgtggccgcggcgccgaagtgctggtcgatggcgaccaggccttcgaagtgcgtcgccgc
gagaccgtcaccgaactgttcgccggcgaaagcctgctgccggagtga

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