Pseudomonas soli: O165_022470
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Entry
O165_022470 CDS
T03276
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmos
Pseudomonas soli
Pathway
pmos00300
Lysine biosynthesis
pmos00470
D-Amino acid metabolism
pmos01100
Metabolic pathways
pmos01110
Biosynthesis of secondary metabolites
pmos01120
Microbial metabolism in diverse environments
pmos01230
Biosynthesis of amino acids
Module
pmos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O165_022470
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O165_022470
Enzymes [BR:
pmos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
O165_022470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIN60933
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Position
4770504..4771751
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AA seq
415 aa
AA seq
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MDAFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALHGVDHLVCFAVK
ANSNLGVLNLLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVY
CFNVESTDELERLQMVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLDVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPELADYIKAIRERVGSRDLALVFEPGRYIVANGGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMDVSAVKPREGQGRAYDLVGPICETGDFLGKDRVLDLAEGD
LLAVRSAGAYGFVMSSNYNTRGRGAEVLVDGDQAFEVRRRETVTELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattcaactaccgcggcggcgagctgttcgcggaaggggtggccctgtcggcg
atcgccgaacgcttcggaacgcccacctacgtgtactcgcgtgcccatatcgaggcgcag
taccgcagctacaccgatgccttgcacggggtggatcacctggtctgcttcgcggtcaag
gccaactccaacctgggcgtgctgaacctgctggcgcgcctgggcgcgggcttcgacatc
gtctccggcggtgaactggaacgcgtgctggccgccggcggccgcgccgatcgcgtggtg
ttctccggggtcggcaagacccgtgaagacatgcgccgcgccctggaagtgggggtgtac
tgcttcaacgtcgagtccaccgacgagctcgagcgcctgcaaatggtggccgccgagatg
ggcaaggtcgcgccggtgtcgctacgcgtgaacccggacgtcgacgccggcacccacccg
tacatctccacgggcctcaaggaaaacaagttcggcatcgccatagccgacgccgaggcc
atctacgtgcgcgccgcgcagttgccgaacctcgacgtggtcggcgtcgactgccatatc
ggctcgcagctgaccaccgtcgagccgttcctcgatgccctcgaccgcctgctggtgctg
gtagaccgcctggccgagtgcggtatccacctgcgtcacctcgacctgggtggcggcgtc
ggcgtgcgctatcgcgacgagcagccgccggagctagccgactacatcaaggccatccgc
gagcgcgtcggcagccgcgacctggccctggtgttcgagccgggccgctacatcgtcgcc
aatggcggcgtgctgctgacccgcgtggaatacctcaagcacaccgagcacaaagacttc
gccatcatcgacgcggccatgaacgacctgatccgcccggccctttaccaggcctggatg
gacgtcagcgcggtcaagccccgcgaaggtcaaggccgggcctacgatctggtcggccct
atctgcgagaccggcgacttcctgggcaaggaccgcgtgctggacctggccgagggcgac
ctgctggccgtgcgctccgcgggcgcctatggtttcgtcatgagctccaactacaacacc
cgtggccgcggcgccgaagtgctggtcgatggcgaccaggccttcgaagtgcgtcgccgc
gagaccgtcaccgaactgttcgccggcgaaagcctgctgccggagtga
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