Pseudomonas soli: O165_022920
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Entry
O165_022920 CDS
T03276
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03420
Nucleotide excision repair
pmos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O165_022920 (uvrD)
03430 Mismatch repair
O165_022920 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_022920 (uvrD)
Enzymes [BR:
pmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O165_022920 (uvrD)
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O165_022920 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
O165_022920 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_11
DUF5681
Motif
Other DBs
NCBI-ProteinID:
AIN61020
UniProt:
A0A1H9HHE2
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All DBs
Position
4862868..4865051
Genome browser
AA seq
727 aa
AA seq
DB search
MHNDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAQNFQILDSD
DQQRLVKRVIREMGLDEQKWPARQVQWFINGQKDEGLRPRHIQASGDLFLATMRDIYVAY
EQACDRAGVIDFSELLLRALDLWRDHPDLLKHYQRRFRHLLVDEFQDTNAVQYAWLRLLA
SGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLIKQGNARDEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQLSMWDAMCQLLAAKALKGRAASALGAFIELLENLAAKVLDMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSDDDADLSPLSAFLGH
ASLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNTVSRPFGGA
KTPASSLFANASIPQTAFSLGQRVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgacgacctctccctcctgctgaactccctcaacgacgcccagcgccaggcc
gtggcggcctccgtcgggcgccaactggtgctggccggcgccggctcgggcaagacccgc
gtgctggtgcaccgtatcgcctggctgatccaggtcgagcaggcctcgccgcactcgatc
ctgtcggtgaccttcaccaacaaggccgcggcggaaatgcgccagcgtatcgagcaactg
ctgggcatcaacccggccggcatgtgggtcggcactttccacggcctggcccaccgcctg
ttgcgggcgcactggcaggaggcagggctggcgcagaacttccagatcctcgacagcgac
gaccagcaacgcctggtcaagcgggtgatccgcgaaatgggcctggacgagcagaaatgg
ccggcacgccaggtccagtggttcatcaacggccagaaggacgagggcctgcgcccacgg
catatccaggccagcggcgacctgttcctggccaccatgcgcgacatctatgtcgcctat
gaacaggcttgcgaccgcgccggggtcatcgacttctccgagctgctgctgcgcgccctc
gacctgtggcgcgaccacccggacctgctcaagcattaccagcgccgcttccgccacctg
ctggtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcc
tccggtggcgacagcctgatggcggtgggtgacgacgaccagtcgatctacggctggcgc
ggcgccaagatagagaacatacaccagtacaccgccgacttccccgacgccgagttgatt
cgcctggagcagaactaccgttccaccggcggcatcctcaaggccgccaacgcgctgatc
gccaacaacagcggacgcctgggcaaggaactgtggaccgacatgggcgagggcgaaccg
ctcacgctctacgccgcgtacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gaaagtctcatcaagcagggcaacgctcgcgacgagatcgccatcctctaccgttccaac
gcccagtcgcgggtgctggaagaggccctgctgcgcgaacgcatcccctaccgcatctat
ggcggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctatctgcgcctg
ctcgaaggccgcggcaacgacgcggcgctggagcgggtgatcaacgtgccgccacgcggc
atcggcgagaagaccgtcgaggccatccgcgaacacgcccgtcacagccagctgtcgatg
tgggacgccatgtgccagctgctggccgccaaggccctcaagggccgcgccgccagtgcg
ctgggcgccttcatcgagctgctcgagaacctcgccgccaaggtgctggacatgccgctg
cacctgatgacccagaccgtcatcgaacagtccggcctgatcatctaccaccaggaagaa
aagggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgcggcccgc
aacttcgagaccagcgacgacgacgccgacctgtcgccactgtcggcgttcctcggccat
gcctcgctggaggccggcgacacccaggccgacgagcacgaggacagcatccagctgatg
accctgcacagcgccaagggcctggagttcccctacgtgttcctggtgggcatggaggaa
ggcctgttcccgcacaagatgagcctcgaagaacccggccgcctcgaagaagaaaggcgc
ctggcctacgtgggcatcacccgggcgatgcgccagctggtcatgacctacgccgagacc
cgtcgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtccgcgagattccg
gccgggctggtgcaggaagtgcgcctgtcgaacaccgtcagccgcccgttcggcggcgcg
aagacgcccgcgagcagcctgttcgccaacgccagcatcccgcagaccgccttcagcctt
ggccagcgggtgcagcatgcggtgttcggcgaaggcgtgatcctcaacttcgagggctcc
ggtgcccaggcgcgggtgcaggtgaacttctccgaaggcagcaaatggctgatgcttggt
tacgccaagctggaagccatctga
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