Pseudomonas soli: O165_024160
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Entry
O165_024160 CDS
T03276
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmos
Pseudomonas soli
Pathway
pmos00260
Glycine, serine and threonine metabolism
pmos00460
Cyanoamino acid metabolism
pmos00630
Glyoxylate and dicarboxylate metabolism
pmos00670
One carbon pool by folate
pmos00680
Methane metabolism
pmos01100
Metabolic pathways
pmos01110
Biosynthesis of secondary metabolites
pmos01120
Microbial metabolism in diverse environments
pmos01200
Carbon metabolism
pmos01230
Biosynthesis of amino acids
pmos01240
Biosynthesis of cofactors
pmos04981
Folate transport and metabolism
Module
pmos_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
O165_024160 (glyA)
09102 Energy metabolism
00680 Methane metabolism
O165_024160 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
O165_024160 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
O165_024160 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
O165_024160 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
O165_024160 (glyA)
Enzymes [BR:
pmos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
O165_024160 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AIN61252
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Position
5143202..5144455
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AA seq
417 aa
AA seq
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MFNKNDTIQANDPILWAAIRAEGIRQEEHVELIASENYTSPVVMQALGTSLTNKYAEGYP
GKRYYGGCEHVDIVETLAIERAKKLFGADYANVQPHSGSQANAAVYMALIKPGDAVLGMS
LAHGGHLTHGSHVNFSGKIYNAIQYGLDDKTGEIDYVEMERLAHEHKPKMIVAGFSAYSR
TIDWQRFRQVADSVGAYLMVDIAHVAGLVVSGHYPSPIPFADVVTTTTHKTLRGPRGGLI
LAKANEDIEKKLNAAVFPGQQGGPLMHAIAAKAVAFDEAMTEEFKRYQGQVVSNAKTMAE
VFESRGYRIVSGGTDNHLMLVDLIAKGITGKAADAALGRANITVNKNAVPNDPQSPFVTS
GIRVGTPAITTRGFKEDEVSQLTGWMCDVMDAIGDERVIEEVRQKVKALCARFPVYS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagaacgacaccatccaggcaaacgaccctatcctgtgggctgcaattaga
gcagaaggcattcgtcaggaagagcatgttgagctgatagcctctgaaaactataccagc
ccagtggtaatgcaggcgctgggtacttcgcttactaataagtatgcagagggttatccg
ggcaagcgctattacggcgggtgtgaacatgtcgatatcgttgaaacattggcaatagag
cgcgcgaaaaaactctttggtgcagattacgccaacgttcaacctcactctggctctcaa
gccaacgcagcggtctacatggccctgatcaagcctggcgacgcggtattgggcatgagt
ctcgcgcatggtggccacctgacccacggctcccatgtaaatttctccggcaagatctac
aacgctattcagtacggcctggacgataagaccggggaaatcgactatgtcgagatggag
cgattggctcacgagcacaagcccaaaatgatcgtggccggtttctctgcctactctcgc
acgatcgattggcagcgcttccgccaggtcgcggacagcgtgggtgcctacctgatggtg
gacattgcccacgtcgccggcctcgttgtgagcggccattatcccagccctattcctttc
gccgatgtggtaaccaccacgactcataagaccctgcgtggtccccgcggtggtctcatc
cttgccaaggcgaatgaggatatcgagaagaagctcaatgctgctgtgttcccggggcaa
cagggtggcccgttgatgcatgcaatcgcggccaaagccgtggcattcgatgaggcgatg
actgaagagttcaagcgttatcaaggtcaggtggtgagtaacgcgaaaacgatggctgag
gttttcgaaagccgtggttatcgcattgtttcgggtggcactgataatcacttgatgctt
gtcgacctgatcgcaaagggcattaccggcaaggcagctgatgcagcgctcggtcgggca
aatatcaccgtcaacaagaatgctgtcccgaatgacccgcagtcgccattcgtcaccagc
ggtattcgagtaggcactccggcgatcactacccgtggcttcaaggaagacgaggtcagc
caattgacgggctggatgtgtgacgtgatggatgcaatcggtgatgagcgagttatcgag
gaggttcgccagaaggtcaaagccctctgcgctcgattcccggtgtactcctaa
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