Pseudomonas soli: O165_024460
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Entry
O165_024460 CDS
T03276
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03030
DNA replication
pmos03410
Base excision repair
pmos03420
Nucleotide excision repair
pmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O165_024460
03410 Base excision repair
O165_024460
03420 Nucleotide excision repair
O165_024460
03440 Homologous recombination
O165_024460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmos03032
]
O165_024460
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_024460
Enzymes [BR:
pmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O165_024460
DNA replication proteins [BR:
pmos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O165_024460
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O165_024460
NER (nucleotide excision repair)
GGR (global genome repair) factors
O165_024460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AIN61305
LinkDB
All DBs
Position
5212477..5215227
Genome browser
AA seq
916 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDVYQNLDKVPGLAIRGAKTLAAKLEEHRDA
AFLSYELATIKCDVELDIEVDALVCGEPDREALLALYAEMEFKSWVAEVQRSAPQAGDGV
AAAEAPVGEKVEPKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQIVGLSFAV
EPHEAAYVPLTHDYEGAPAQLDRERVLLALKPLLEDPAKGKIGQNAKYDINILANGSPAI
HMRGVAYDTMLESYVLDSTATRHDMDSLAQKYLDHTTIGFEDIAGKGAKQLTFNQIPLDK
AGPYAAEDADITLRLHHALQARLAQTPSVLPVLMDIEMPLVPVLAKIERQGALVDARLLG
VQSGELGAKLVELEREAYALAGEEFNLGSPKQLGAILYDKLGMPVLSKTAKGQPSTAEAV
LDDLAEQGYPLPKVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSS
DPNLQNIPIRTAEGRRIRQAFVASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLD
VHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYF
ARYPGVLAYMERTRAQAAEKGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTA
ADIIKRAMVAVDNWLTESGLDARVILQVHDELVLEVREDLVEQVKAEIRVHMSGAAQLDV
PLLVEAGVGSNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcgtcctacctctaccgcgcctttcac
gcgctgccgccgctgaccacctccaaaggcatgcccaccggcgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagcctgttcgcagtggtcttcgat
gccaagggcgggaccttccgcgatgccatgttcgccgagtacaaggccaaccgcccgagc
atgcccgacgacctgcgggtgcaggtggaaccgctgcacgccagcgtccgcgccctgggc
tacccgctgctgtgcgtcgaaggcgtggaggccgacgacgtgatcggcaccctggcgcgc
agcagcgccgccgccggccgcccggtgatcatctcgaccggcgacaaggacatggcccag
ctggtggacggccacgttaccctcgtcaataccatgaccgggagcgtgctcgacgtcgct
ggcgtgcacgagaagtttggcgtaggtcccgaacacatcatcgattttctcgccctgatg
ggcgacaaggtcgacaacattcccggcgtgccgggcgttggcgagaagaccgcagtcggc
ttgttgaccggtatcggtggtggcctgagcgatgtgtaccagaacctggacaaggtgccg
ggcttggccattcgtggcgccaagaccctcgccgccaagcttgaagagcaccgcgacgcg
gccttcctctcctacgagctggccaccatcaagtgcgatgtcgagctggatatcgaggtg
gacgccctggtctgcggcgagccggaccgtgaagcactgctggcgctgtacgccgagatg
gagttcaagagctgggttgccgaagtccagcgcagcgctccccaggccggtgatggcgtc
gctgccgccgaggctcctgtgggcgagaaggtcgagccaaagtacgaaaccatcctcgac
caggctcgcttcgacgcctggctggaaaagctgcgtcaggcgccgctgttcgccttcgat
acggaaaccactggcctggatgcccagcaggcacagatcgtcggcctgtcgttcgccgtc
gagccccatgaagccgcctatgtgcccctgactcacgactacgaaggcgctccggcccag
ctggaccgcgagcgcgtgctgctggcgctcaaaccgctgctggaggatccggccaagggc
aagatcggccagaacgccaagtacgacatcaacatcctggccaatggcagcccggccatc
cacatgcgcggcgtggcctacgacaccatgctcgagtcctacgtgctcgactccacggcc
acccgtcacgacatggatagcttggcgcagaagtacctggaccacaccaccatcggcttc
gaggatatcgccggcaagggcgccaagcagctgaccttcaatcagatcccactggacaag
gctggcccctacgccgccgaggatgccgatatcaccctgcgtctgcaccatgcgctgcag
gcgcgcctggcccagacgcccagcgtgctgccggtgctgatggatatcgagatgccgctg
gtgccggtgctggcgaagatcgagcgccagggcgcactggtcgacgccaggctgctcggc
gtgcagagtggcgagctgggggcgaagctggtcgagctggagcgtgaggcgtatgcgctg
gctggcgaggaattcaacctgggctcgcccaagcagctcggcgcgatcctctacgacaag
ctgggcatgccggtgctgagcaagaccgccaagggccagccgtccaccgccgaggcggtc
ctggatgacctggccgaacagggctacccgctgcccaaggtgctgatgcagtaccgcagc
ctgagcaagctaaagagcacctacaccgacaagctgccggggcagatcaacccgcgtacc
ggccgcatccatacctcgtaccagcaagcggtggctgccaccggtcgcctgtcgtccagc
gacccgaacctgcaaaacatcccgatccgcaccgccgagggccggcgcattcgccaggct
ttcgttgccagccccggctacaaattgctggcggcggactattcgcagatcgagctgcgc
atcatggcccacctggccaaggacgaagggctgctgcacgccttccgcaacgacctggac
gtgcaccgcgccaccgctgcagaggtattcggcgtcgctctcgaggacgtcaccaccgac
cagcgccgcagcgccaaggcgatcaactttggcctgatctatggcatgagcgctttcggt
ctggccaagcagatcggcgtcgatcgcaagcaatcgcaggactacatcgaccgttatttc
gcccgttacccaggcgtgctggcctatatggagcgcacccgcgcccaggccgctgaaaag
ggcttcgtcgagaccctgttcgggcgtcgtctgtacctgccggacatcaacgccaagaac
ccggccttgcgcaaaggcgccgagcgcaccgcgatcaacgcgccgatgcagggcactgcg
gcggacatcatcaagcgcgccatggtggcggtggacaactggctgaccgagagcgggctg
gatgcacgggtgatcctgcaggtgcacgacgaactggtgctcgaggtgcgcgaagacctg
gtcgaacaggtgaaagccgagattcgggtccacatgagcggcgcggcgcaactggacgtg
ccgttgctggtggaagcgggcgttggctcgaattgggacgaagctcactaa
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