Pseudomonas soli: O165_026250
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Entry
O165_026250 CDS
T03276
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O165_026250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmos03021
]
O165_026250
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_026250
Enzymes [BR:
pmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O165_026250
Transcription machinery [BR:
pmos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O165_026250
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O165_026250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AIN61636
UniProt:
A0A1H9UPL0
LinkDB
All DBs
Position
5645584..5649783
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQVEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLMDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLHAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAG
EAALHAKIKVRINETVKDRDGSITKNTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKKA
ISKLINQCYRVVGLKETVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIGTATDE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVEQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLSVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTDQGLLMTPHIEGGDVVEPLGERVL
GRVIARDVFKPGTEDVIVPAGTLVDEQWVEFIELNSIDEVVVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSVQVKNGGMVRL
HNLKQVERADGNLVAVSRSGELAIADEFGRERERYKLPYGAVISVKEGDKVEAGAIVAKW
DPHTHPIVTELKGTVTFVGMEENITIKRQTDELTGLTNIEVLDVKDRPAAGKEIRPAIKM
VDANGKDLYLPGTDVPAQYFLPANALVGVADGAQIGVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEASILAEVSGTIAFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNRGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEISESGDSSFIKGDQMELTQVLVENERLAGEDKFISKFTRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRRRDADKPLR
VSASEVEAALTEALNSSGN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacctactgaatttgctgaaaaaccagggtcaagtcgaagagttcgacgccatc
cgcatcggtctggcgtcgcctgaaatgatccgttcgtggtcgttcggtgaagtcaagaag
ccggaaaccatcaactaccgtacgttcaagcctgagcgtgacggcctgttctgcgccaag
atctttggcccagtcaaggactacgagtgcctgtgcggcaagtacaagcgcctcaagcac
cgcggcgtgatctgcgagaagtgcggcgttgaagttgccctggccaaggttcgtcgtgag
cgcatggcgcacatcgaactggcctcgccggttgcccacatctggttcctgaagtcgctg
ccgtcccgtatcggcctgctgatggacatgaccctgcgtgacatcgagcgcgtgctctac
ttcgagagctacgtggtgatcgatccgggcatgaccaccctcgagaaaggccagctgctg
aacgacgagcagtacttcgaagcgctggaagagttcggtgacgacttcgacgcccgcatg
ggtgccgaggctgtccgcgagctgctgcacgctatcgacctggagcacgagatcggccgc
ctgcgcgaagaaattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgc
ctgaagctgatggaagctttccaggggtcgggcaacctgcctgagtggatggtcctgacc
gtcctgccagtactgccaccggacctgcgtccgctggtaccgctggatggcggccgcttc
gcgacctccgacctgaacgacctgtatcgtcgggtgatcaaccgtaacaaccgtctgaag
cgcctgctcgatctgtcggcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtcgacgccctgctcgacaacggccgtcgcggtcgcgccatcactggctcgaac
aagcgtccgctgaagtccctggccgacatgatcaaaggtaagcaaggtcgcttccgtcag
aacttgctcggtaagcgcgtggactactccggtcgttcggtaattaccgtaggcccgacc
ctgcgtctgcaccagtgcggtctgccgaagaagatggccctcgagctgttcaagccgttc
attttcggcaagctggaaatgcgtggtctggcgaccaccatcaaggctgccaagaagatg
gtcgagcgcgagctgccggaggtgtgggacgttctcgccgaggtgatccgcgaacacccc
gtactgctcaaccgtgcgccgactctgcaccgtctgggtatccaggcctttgaaccggta
ctgatcgaaggtaaggctatccagctgcatccgctggtctgcgccgcgtacaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgaccctggaagcccagctcgaagcg
cgcgcgctgatgatgtcgaccaacaacatcctgtcgccagccaacggtgagccaatcatc
gttccgtcgcaggacgtggtactgggtctgtactacatgacccgtgaagccatcaacgcc
aagggcgaaggtcgcgtattcgccgacctgcaggaagtcgaccgcgttttccgcgccggc
gaagccgccctgcacgcgaaaatcaaggttcgtatcaacgaaaccgtgaaagaccgtgat
ggcagcatcaccaagaacacccgtatcgtcgacaccaccgtcggccgtgcgctgctgttc
caggtagtaccggccggcctgccgttcgacgtcgtcaaccagtcgatgaagaagaaggcg
atctccaagctgatcaaccagtgctaccgcgtggtgggtctgaaagagaccgtgatcttc
gctgaccagctgatgtacaccggttttgcctactcgaccatttccggcgtttcgatcggc
gttaacgacttcgttattccggacgagaaagcccgcatcatcggtaccgctaccgacgaa
gtgaaggaaatcgagagccagtacgcctccggcctggtcacccagggcgagaagtacaac
aaggtcatcgacttgtggtccaaggcgaacgacgaagtgtccaaggcgatgatggccaac
ctctcgaaagagaaggtcgtcgaccgcgagggcaaggaagtcgagcaagagtccttcaac
tcgatgtacatgatggccgactccggtgcgcgtggttccgccgctcagatccgtcagctg
gccggtatgcgtggcctgatggccaagccggacggctcgatcatcgagacgccgatcacc
gcgaacttccgtgaaggtctgagcgtactgcagtacttcatctcgactcacggtgctcgt
aaaggtctggcggataccgcgttgaaaaccgcgaactccggttacctgactcgccgtctg
gtagacgttgcccaggatctggtcgtgaccgagatcgactgcggcaccgaccagggcctg
ctgatgaccccgcacatcgaaggcggtgacgttgtcgagccgctgggtgagcgcgtactg
ggccgtgtcattgcccgtgacgtgttcaagccaggcaccgaggacgtcatcgttccggcc
ggtaccctggtcgacgagcagtgggtcgagttcatcgagctgaacagcatcgacgaagtc
gtcgtgcgttcgccgatcagctgcgaaacccgctacggcatctgcgccaagtgctacggt
cgtgacctggctcgtggtcaccaggtgaacattggtgaagctgtcggcgttatcgctgcg
cagtcgatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggtgct
gcaagccgtacttcggctgctgacagcgtccaggttaagaacggcggtatggtgcgcctg
cacaaccttaaacaggttgagcgtgccgacggtaacctggttgccgtatcgcgttccggc
gagctggcgattgccgacgagttcggtcgtgagcgtgagcgttacaagctgccttacggt
gccgtgatttcggtcaaggaaggtgacaaggtcgaagctggcgccatcgtcgccaagtgg
gacccgcacacccacccgatcgttaccgagctgaaaggtaccgtgaccttcgtgggcatg
gaagaaaacatcaccatcaagcgtcagaccgacgaactgaccggtttgaccaacattgaa
gttctggacgtcaaggatcgccctgccgcaggcaaggaaatccgtccggcaatcaagatg
gtcgacgccaatggcaaggacctgtacctgccaggtaccgacgtacctgcccagtacttc
ctgccggccaacgccctcgtcggcgtggctgacggtgcccagatcggcgtcggtgacgtt
atcgcgcgtatcccgcaagaaacgtcgaagacccgtgacatcaccggtggtctgccacgc
gttgccgacttgttcgaagcgcgccgtccgaaagaagcctcgatcctggctgaagtcagc
ggcaccatcgcgttcggtaaagagaccaagggcaagcgtcgcctggtcatcactccgacc
gacggtagcgatccgtatgaagagctgattccgaagtggcgccatctgaacgtcttcgaa
ggcgaacaggtcaaccgcggcgaagttatctccgacggtccgagcgatccgcacgacatc
ctgcgtctgctgggtgtgagcgcgctggcgaagtacatcgtcaacgagatccaggacgtt
taccgtctgcaaggcgtgaagatcaacgacaagcatatcgagaccatcctgcgtcagatg
ctgcgcaaggtcgagatctccgagtcgggcgattccagcttcatcaagggcgaccagatg
gaactgactcaggtcctggtagagaacgagcgtctcgccggcgaagacaagttcatctcc
aagttcacccgtgtgttgctgggtatcaccaaggcttcgctgtccaccgaatcgttcatc
tcggcggcttccttccaggaaaccacccgtgtactgaccgaggcggcggtaaccggcaag
cgtgactacctgcgcggcctgaaagagaacgtggtcgtgggtcgtctgatcccggccggt
accggtctggcctaccacagcgagcgcaagcgtcgccgtgatgccgacaaaccgctgcgt
gtgagcgccagtgaggtggaagccgcactgaccgaagcactgaattccagcggtaactaa
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