Pseudomonas soli: O165_027230
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Entry
O165_027230 CDS
T03276
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O165_027230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_027230
Enzymes [BR:
pmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O165_027230
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O165_027230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
Viral_helicase1
SH3_13
UvrD-helicase
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
AAA_17
T2SSE
nSTAND3
NACHT
NTPase_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIN61824
LinkDB
All DBs
Position
5850534..5852609
Genome browser
AA seq
691 aa
AA seq
DB search
MSRNLDDLLPTPLQAEHLSALAPLSASHDLLALLDRWVERGWLRALDRAFVSFLEERAPG
SDPLVLLAAALASHQLGHGHVCLDLRQTLAEPDFALSLPPEGDALAGPLLLPSQLLASLD
LGTWLQRIAVSPLVAAGDSVEQRARPLVLSAERLYLRRYWAYERRIDGALHERLARRQPQ
PADLAQRLAQLFDGGSAAGEVDWQKLACALATRAGFSVITGGPGTGKTTTVVRLLALLQG
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVDVEVRAQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVIDEASMIDLEMMANLLDALPSTARLVLLGDKDQLASVEAGA
VLGDLCRDAEEGCYWPQTLAWLEQVGGQSLAGIGLKPGDGQRNPLAQQIVMLRHSRRFGE
GSGIGQLARLVNRQQALEARALLATRPADVHCLTLGGEHDKRFDRLLLDGLGQGGEGPQG
YRGYLRTIGRLRPPPGTPGDDPRWERWAAEVLQSFEAFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDEQGEALLRVAFPRNDG
SGGVRFVLPSRLSEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLIEPRAGVFEEAVERKVRRVSGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaacctcgatgacctgctgcccacgccattgcaggcggagcatctgagcgcc
ctggcgccgctgagcgccagccacgacctgctggcgttgctcgatcgctgggtcgagcgc
gggtggttgcgtgccctggatcgggccttcgtgagttttctcgaggaacgggcgccaggc
agtgacccgttggtgctgctggccgcggcgctggccagccaccagctggggcatgggcat
gtctgtctggatctgcgccagactctcgcggaaccagacttcgccctgtcgctgcctccg
gaaggcgatgccctggccgggccgctgctgctgccttcgcaactgctggccagccttgac
ctgggtacttggctgcaacggatcgccgtgagcccgctggtcgcggcgggcgatagcgtc
gaacagcgcgcccggccactggtgctcagcgccgagcgtttgtacctgcgccgctactgg
gcctacgagcggcggatcgacggcgccctgcatgagcgcctggcacgccgtcagcctcag
cccgccgatctggcccagcgcctggcgcagctgttcgacggcggctcggcggccggcgag
gtggactggcagaagctggcatgcgccctggccacccgagcgggtttcagtgtgatcacc
ggcggccccggcaccggcaagaccaccaccgtggtgcgcctgctggcgttgttgcagggg
ccggcggtcgagcaaggccgaccgctgcgtatccgcctggcggcaccgaccggcaaggcc
gcggcgcgcctgaccgagtccatcggccagcaggtcgagcgcctgcaggtggacgttgag
gtacgggcgcagatccccaccgaggtcagcaccgtgcaccgcctgctgggcagccgccca
ggctctcggcatttccgccatcatgccggcaacccgttgccgctggacgtgctggtgatc
gatgaagcctcgatgatcgacctggagatgatggccaacctgctcgatgccctgccgtcc
accgcccggctggtgctgctgggcgacaaggaccaactggcctcggtggaagccggggcg
gtgctgggcgacctgtgtcgcgacgccgaggaaggctgctactggccgcagaccctggcc
tggcttgagcaggtgggcgggcagtcgctggcgggcattggcctgaaaccgggcgatggg
cagcgcaatccgctggcccagcagatcgtgatgctgcgtcattcgcggcgtttcggcgaa
ggcagcggcatcggccaattggcgcgcctggtcaatcgccagcaggcgctggaggcgcgg
gcgctgctggcgacccgacctgcggacgttcattgcctgaccctgggcggcgaacacgac
aagcgcttcgatcgcctgttgctcgacggccttggccagggcggcgaagggccgcagggt
taccgtggctacctgcgcaccatcggccgcttgcgcccgccgcctggcacgccgggcgac
gatccgcgctgggagcgttgggccgccgaggtactgcagagcttcgaagccttccagctg
ctttgcgccgtgcgcaggggcgcctggggtgtcgaaggcctgaacgaacgcgtggcccgg
gtgctgcacaatgccggactgatcgatagccagcaaccctggtacgagggccgcccggta
ctggtcacccgcaatgactacggcctcggcctgatgaacggtgatatcggcattgccctg
cgcctgccggacgagcagggcgaggcgttgctgcgcgtggccttcccgcgcaacgatggc
agcggcggggtgcgcttcgtcctgcccagccggctcagcgaagtggaaaccgtgttcgcc
atgaccgtgcacaagtcccagggctcggaattcagccataccgcgctggtgctgcccgat
gccttgaacccggtgctgaccaaggaactggtgtacaccggcatcacccgcgccaagcat
tgcttcagcctgatcgagccgcgcgccggggtgttcgaggaagcggtggagcgcaaggtc
aggcgtgtctcggggctgatgctggagcaagtctga
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