Pasteurella multocida 36950: Pmu_04730
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Entry
Pmu_04730 CDS
T01729
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmp
Pasteurella multocida 36950
Pathway
pmp03420
Nucleotide excision repair
pmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pmu_04730 (uvrD)
03430 Mismatch repair
Pmu_04730 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmp03400
]
Pmu_04730 (uvrD)
Enzymes [BR:
pmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pmu_04730 (uvrD)
DNA repair and recombination proteins [BR:
pmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pmu_04730 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Pmu_04730 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AET15399
LinkDB
All DBs
Position
481409..483589
Genome browser
AA seq
726 aa
AA seq
DB search
MDISALLDGLNDKQRDAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVEQVSEGSIMAV
TFTNKAAAEMRHRIESTLANHASQRLFGMWVGTFHSIAHRLLRAHHLDANLPQDFQILDA
DDQLRLVKRLLKLHNFDEKIFIPKQVCWYINNKKDDGLRAHQIDDNNDRHEREWIKIYQI
YQDTCDRAGLVDFAELLLRAYELWLKKPVILQRYQQRFQHILVDEFQDTNKIQYAWVKLL
AGEQGKVMIVGDDDQSIYGWRGAKIENIQRFLDDFSNAQTIRLEQNYRSTGNILASANQL
ISNNSNRLGKNLWTDGEKGEPVGIYAAFNELDEALFVSSQIKQWIENGGKLKDCAILYRS
NSQSRVIEEALIRSQLPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPR
SIGERTLDMLRSVTREREVTLWQATQLAIHENLLTARAATALQRFLELINSLQQDTSEMP
LFAQTDFVIKHSGLYAMYQQEKGEKGEVRIENLEELVTATKEFIKPDEAEQLSDLTAFLT
HASLEAGEEQASPHQDYVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKQKLTICYAESRRLYAKEERHLPSRFIAELPTECIQEIRLRGTVTRAMNQ
QKVGSVAPSLQENEWKMGQKVLHSKFGQGTIINVEGAENNTRLQIAFQNQGIKWLIAHLA
KLEKIR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagcattattagatgggttaaatgataaacaacgtgatgcggttgccgcg
ccactcggcaattacttggtgttggcgggggccgggagtggtaaaacacgtgttttaaca
catcgtattgcttggttaattgcagtggaacaggtttctgaagggagtatcatggcagta
accttcaccaataaagccgcggctgaaatgcgtcatcgtatcgaaagcaccttagctaat
catgcttctcaacgtttatttggtatgtgggtgggcacgttccacagcattgcccaccgc
ttattgcgtgcccatcatcttgatgccaacttaccccaagatttccaaattctcgatgcg
gatgatcaactgcgtttagtgaagcgcctactcaaattacataattttgatgagaaaatt
tttattcctaagcaagtctgctggtatatcaataataaaaaagatgacgggttaagagcg
caccaaattgatgacaataatgatcgacatgagcgggaatggataaaaatttatcagatt
tatcaagatacttgtgatcgtgctggtttagtggattttgcggaattgttattacgtgct
tacgaattatggctgaaaaagcctgtgattttacagcgttatcaacaacgttttcagcac
attttggtcgatgagttccaagatactaataagatccaatatgcttgggtaaaattgctt
gcgggggaacaaggcaaggtgatgatcgtgggagatgacgatcaatcgatttatggttgg
cgcggggcaaaaattgaaaatatccaacgctttttagatgatttttccaatgcgcaaacc
atccgtcttgaacaaaattatcgttccacggggaatattttggcaagtgccaaccagctt
atttccaataacagcaatcgccttggtaaaaatttgtggacggacggagaaaaaggtgag
ccagtaggaatctatgcggcttttaatgaattagatgaagccttatttgtttcctcacaa
attaaacaatggatagaaaatggcggtaagctaaaagattgtgccattttataccgcagt
aatagccaatcccgtgtgattgaagaggcgttaattcgttctcaattaccttatcgtatt
tatggcggtatgcgtttcttcgagcgtcaagagattaaagatgcccttgcttatttacgt
cttattgccaatcgtcaagacgacgccgcgtttgaacgcgtggtcaatacgccacctcgt
agtattggtgaacgaacgttagatatgctacgtagtgtgacccgcgaacgtgaagtgact
ttgtggcaagccacccaattagccattcatgaaaatttactgacggcgagagcagcaacc
gcactacaacgctttttagagttgattaattccttacagcaagataccagtgaaatgccc
ttatttgcgcaaaccgattttgtgattaagcattctggtttatatgccatgtatcaacag
gaaaagggggaaaagggtgaagtgcggatcgaaaacttagaagagttagtgactgccaca
aaagaatttattaagccagatgaggcagaacagttatctgatttaacagcctttttaact
catgcctccttagaagcaggggaggaacaagcttctccacatcaagactatgttgaaatg
atgacattgcactctgcaaagggattggaattccctcgggtatttatggtgggggttgaa
gaagggttatttccaagtttccgatcttttgaagagccggggcgtttagaagaagagcgt
cgcttagcttatgttgggatcacgcgcgcaaaacaaaagttgacgatttgctatgcggaa
agtcgccgtctatatgccaaagaagaacgtcatcttccttcccgttttattgctgaatta
cctacggaatgtattcaagaaatccgcttacgtggtacggtgacacgtgccatgaatcag
cagaaagtcggatcggttgcaccgagtttacaggaaaatgaatggaaaatggggcaaaaa
gtgctacatagcaaatttgggcaaggcacgatcattaatgtggaaggggcggagaataat
actcgcttacaaattgcattccaaaatcaagggattaaatggctgattgcccatttagcc
aaattagaaaaaattcgttaa
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