Pasteurella multocida 36950: Pmu_05440
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Entry
Pmu_05440 CDS
T01729
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pmp
Pasteurella multocida 36950
Pathway
pmp00230
Purine metabolism
pmp00240
Pyrimidine metabolism
pmp01100
Metabolic pathways
pmp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Pmu_05440 (ygdH)
00240 Pyrimidine metabolism
Pmu_05440 (ygdH)
Enzymes [BR:
pmp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
Pmu_05440 (ygdH)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
STALD
Motif
Other DBs
NCBI-ProteinID:
AET15461
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All DBs
Position
complement(559079..560446)
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AA seq
455 aa
AA seq
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MDKNIYYVNPRGSMDQLSHLEVELLTKKAKSQLYTLYRNCSLAVLNSGAVTDDSRALLNK
YPDFDIHLVARERGVSLELHNPPKEAFVDDRIIRSIQYHLFAVLRDILFVNVMSQRLNPD
NIQDSKHITNLVFAILRNAKALPIGEHPNLVVCWGGHSINQVEYQYCRTVGTELGHRELN
IITGCGPGVMEAPMKGAAIGHANQRYKHSRFIGITEPSIIASEPPNPIVNELIIMPDIEK
RLEAFVRMGHGIVIFPGGPGTFEELLYILGIKLAEENKGKTLPLILTGPKESADYFATID
RFIGDTLGKEAQALYDIIIDDPVKVARKMSQTMHDVKMERYQTGDAYGFNWSLKIPTDFQ
QPFIPTHENMANLDLHRNQSTLGLIANLRRAFSGIVAGNIKPETQDAIEEYGVFKLHGDA
ELLDKIDQVLQDFIVQHRMKLPDGNDYVPCYELVK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaatatttattatgtgaatccacgcggaagcatggatcagctctctcattta
gaggtcgagctactcaccaaaaaagccaaaagtcaactttataccctttatcgtaattgt
tcactggcggtcttaaactctggtgccgtgacggatgatagccgtgcattgctcaataaa
taccctgattttgatattcatctggtggcaagagaacgtggtgtttcccttgagctacat
aatcctcccaaagaagcatttgttgatgatcgcattattcgaagtattcaatatcatttg
tttgctgtactgcgtgacattttatttgtcaatgtgatgagccaacgtttaaaccctgac
aatattcaagacagtaaacacatcacaaatttggtgtttgctatcttgcgtaacgctaaa
gccttaccgattggtgaacatccaaatcttgtcgtgtgttggggagggcattcgattaat
caagtggaatatcaatattgtcgtacggtaggcaccgaactgggtcatcgtgaattgaat
attatcactggttgtggaccaggtgtcatggaagccccgatgaaaggggcagcaattggt
catgcgaaccaacgctataagcatagccgatttatcgggattacagagccatcaattatt
gcttccgagccacctaatccgatcgttaatgaattaattattatgcctgatattgaaaaa
cgtcttgaagcattcgtgcgtatgggacatggcattgtgattttcccagggggaccgggt
acttttgaggaattactttatattcttggcatcaaattagcagaagaaaataaaggcaaa
acattacctttaattttaacgggaccaaaagaaagtgcggattatttcgcgacgattgac
cgctttattggtgatacattaggtaaagaagctcaagcattatatgacatcattatcgat
gaccctgtaaaagtggcaagaaaaatgagccaaacgatgcatgacgtcaaaatggaacgc
tatcaaaccggcgatgcttatggctttaattggtcactgaaaattccaacggatttccaa
caaccatttattcctacccatgaaaatatggcaaatcttgatctccaccgtaatcaatct
acactgggtctgatcgccaatttacgccgcgccttctcaggtatcgtggcaggcaatatc
aaaccagaaacacaagatgcgattgaagaatacggggtatttaaattacatggggatgca
gaactcttggataaaatcgatcaggttttacaagattttattgttcaacatcgcatgaaa
ttacctgacggaaatgattatgtgccttgctatgaattagtcaaatag
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