Pasteurella multocida 36950: Pmu_05790
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Entry
Pmu_05790 CDS
T01729
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmp
Pasteurella multocida 36950
Pathway
pmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pmu_05790 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmp03400
]
Pmu_05790 (recD)
Enzymes [BR:
pmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Pmu_05790 (recD)
DNA repair and recombination proteins [BR:
pmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pmu_05790 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_16
AAA_33
AAA_28
AAA_7
AAA_29
PhoH
T2SSE
FtsK_SpoIIIE
NTPase_1
UvrD_C
DO-GTPase1
NACHT
NPHP3_N
AAA
DEAD
TrwB_AAD_bind
AAA_5
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AET15496
LinkDB
All DBs
Position
590176..592149
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AA seq
657 aa
AA seq
DB search
MLATLKELKQHKVISEGDYYFAQLIAGKQPDELSREQKNLAILLAALCSYSYQQGNTCLF
LEKGLESNYFNLAYRTAEQHYLHIIQEKIAFLPIECWQSSLADHIAFTATPLEKVAPLVF
QFNALYFYRIWQDEYRVAHYLQRAVQRGAETAPIAYEQINAILMHYFPAVQQIEGVNWQK
VAVATALKQPFCLITGGPGTGKTTTVARLLLALQTLSACQLKIKLVAPTGKAAARLTESI
NGALTRLAQENMAICADLIASIPTTAQTLHRLLGIRFFEETPTFHPNNPLPLDVLVVDEA
SMIDLPLMAKLLQALKPNTKLILLGDENQLSPVEAGEMLGALSEFSQHAYSPTLTQYLKA
VADIELISSDQGSPLRDHLCRLHHSHRFSGDSGIGQLAQAINQGNVEVSWNAFTHFNDIE
MVDFDQVALLKGDNPSLYSQACAALVVKSAVEKYTDYLVKLKALQQQSPILNEQQVGEIF
VLFNAVRFLTALRVGELGVEQLNQKIAQRLQQKGLLDFKHERDWYLGKPIMIQQNDRHIG
LYNGDIGLFLGQGKVWFEQGQGHYKTVLASRVPNYETAFVMTVHKSQGSEFAHTCLVLPT
EPNPILSRELIYTGVTRAKQQLTVFSSAEIWKSAVKNPVKRQSGLNQLLVELFNKSD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctaccttaaaagaattaaaacaacacaaggtgatcagtgaaggagattactac
tttgcgcaattgatcgcgggtaagcaaccagatgaactgtcgcgggaacagaaaaattta
gccatattgcttgccgcactttgtagttacagctatcaacaaggcaatacttgcttattt
ctagagaaagggctggaatctaattattttaatttggcttatcgaacagcagagcagcat
tatctccatattattcaagaaaaaattgcttttctaccgattgaatgttggcaatcaagc
ttggcggatcatatagcgtttacagcaacgccgctggaaaaagtcgcccctttagtgttt
cagtttaatgcgctttatttttatcgtatctggcaagatgaataccgagttgctcattat
cttcaacgtgcagtacagcggggggctgagacagcgcctattgcttatgagcaaatcaac
gcgatcttaatgcactattttcctgcggtacagcaaatagaaggggtgaattggcaaaaa
gtagcagtagcgaccgcgttaaaacaaccattttgtttgattacaggtggtccaggaaca
gggaaaaccactactgtcgcacgtttactcttggcgttacagacactttctgcgtgtcag
cttaagattaagttagttgcacctacaggcaaagcggcagcacgcttgacggagtcaatt
aatggtgcgttaacgcgtttagcacaagaaaatatggcgatctgtgccgatttaattgcc
tctattccgactacagcgcagaccttacatcgtttattgggcatacgtttttttgaagaa
acacccacctttcatccaaacaatccattgccattggatgtattggtggtcgatgaggcg
tctatgattgacttgccattaatggcgaaattattacaggcactcaaaccgaataccaaa
ttaattttgcttggagatgaaaatcaattgtctcctgtggaagcaggggaaatgttggga
gcgttgtctgaattttctcaacacgcctatagtcctacgttaacccagtatttaaaagca
gtggcggatattgagttaatttcgtcagatcaaggttccccgttgcgtgatcatttatgc
cgtttgcatcatagtcatcgtttttcgggggattctgggattggacaattagcgcaggcg
attaatcaaggcaatgttgaggtaagttggaacgcatttacccattttaatgatatcgaa
atggtggattttgatcaggttgccttattaaaaggagataacccgagtttatatagccaa
gcgtgtgcagcgttagtggtaaaaagtgcggttgaaaaatacacagattatttagtgaaa
ctgaaagcattacaacaacagtcacctatactgaatgaacaacaagttggagaaattttt
gtcttgtttaatgcggttcgtttcttaacagcattacgcgttggagagctaggggtagaa
cagctaaatcagaaaatcgcgcaacgcttacaacaaaaaggcttacttgattttaaacac
gaacgcgattggtatttaggtaaaccaattatgatccagcaaaatgatcgccatattggc
ttatataatggcgacattggcttatttttaggacaaggtaaagtctggtttgagcaggga
caagggcattataaaactgtgctcgctagccgtgtgccaaactatgagaccgcgtttgtg
atgacggtacataaatcacaagggtctgagtttgcgcacacgtgtttggtattaccgacc
gaacctaacccgattttatcacgtgaattgatttatacaggcgtgacacgtgcgaaacag
caattaaccgttttttcaagtgccgaaatttggaaaagtgcggtgaaaaatccagtaaaa
agacaaagtggcttgaaccaattgttagttgaattatttaacaaatctgattag
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