Pasteurella multocida 36950: Pmu_12900
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Entry
Pmu_12900 CDS
T01729
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmp
Pasteurella multocida 36950
Pathway
pmp03030
DNA replication
pmp03430
Mismatch repair
pmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pmu_12900 (dnaE)
03430 Mismatch repair
Pmu_12900 (dnaE)
03440 Homologous recombination
Pmu_12900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmp03032
]
Pmu_12900 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmp03400
]
Pmu_12900 (dnaE)
Enzymes [BR:
pmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pmu_12900 (dnaE)
DNA replication proteins [BR:
pmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pmu_12900 (dnaE)
DNA repair and recombination proteins [BR:
pmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pmu_12900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AET16176
LinkDB
All DBs
Position
complement(1391796..1395275)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSQPRFVHLRVHSDFSMINGIAKVKPLIKACVDNHMVAMGLTDFTNFCGLVRFYGEALSA
GVKPIIGADVLVRSELCGDEPFELTLLAKNNIGYHNITLLLSKAYERGYQDLPYLDQAWL
AEYREGIIVLSGGHNGDVGKKLLKGHAAEIESAVAFYQDFFPEHFYLSLSRTGRYEEERY
VSLALTLAEEKGLPVVATNDVLFLHEDDFEAHEIRVAIHDSYTLDDPKRPKLYTNQQYFR
SEQEMCDLFADVPSALENTLLIAQRCNVTIRLGEYFLPQFPTGDLSTEDFLVKKSKEGLE
ERLKFLFPDEKVRQARRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDHVAET
YGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFAAEPQL
QAVYDSDEEVKALIDMARKLEGVTRNAGKHAGGVVISPGLITDFSPLYCDSEGKHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALDMINTRLAKEGKPPVDIATIPLDDPASFELLK
RSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGNEVV
AYPDPEYQHDSLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMA
AQREIFEKGAIQKGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTSEMDNTDKIVGLYDECLRMGLKVAPPDINTGKHHFSVNEHGEIVYGIGAIKGV
GEGPIEALISAREQGGIFKDLFDLCARVDLKKINRRTFESLILSGAFDKLGPHRAALSKN
LEDALKASDQHAKDAAMGQADMFGVLTESHEDVEKAYASTPRWSEKVILEGERETLGLYL
SSHPISPYLKELAHYSATRLKDLVPNSRGQMSTVSGLLVSSRFAVTKKGNRLGIATLDDR
SGRLDITLFGEALDKYADKLQKDTVIIVSGQVSFDEFSGGLKMSVRELMSLDEARSRYAK
SLAICLSEENMKPTFIRELKALLTPYSGGTLPIYVYYASTAGQCRVKMGVQWSVNPTDQL
FTELAEKLGENAVELEFQS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccccgttttgttcaccttcgcgttcacagtgatttttccatgattaatggg
attgccaaagtcaagccattaattaaagcctgtgtcgataatcatatggtggcaatgggc
ttaacagactttactaacttttgtggtttagtgcgcttttatggcgaggcattatctgct
ggtgtgaaacccattattggagcagatgtgctggtgagaagtgaactttgtggtgatgaa
ccttttgagctgacattactggctaagaacaatataggctatcacaatattactttgctg
ctctctaaagcctatgagcgaggttatcaagatctcccttatctagaccaagcctggctc
gctgaataccgtgaagggattattgtactgtcagggggacacaatggtgatgtgggtaaa
aaattactaaaaggtcatgcggctgagattgaaagtgcggtcgctttttatcaagatttt
ttccccgaacacttttatttgagtttgagccgcacaggacgttatgaagaagaacgctat
gtgagtttggctttgacattggcagaagaaaaaggcttgcccgttgttgccactaatgat
gtgttatttttgcatgaagacgattttgaagcccatgaaattcgcgtcgccattcatgac
agttacacccttgatgatcctaaacgtcctaaactttataccaatcagcaatattttcgc
tctgagcaagaaatgtgtgatctttttgcagacgtgccttcggcattagaaaatacctta
ctgatcgcgcaacgttgtaatgtgacgattcgtcttggagagtattttttaccacaattt
ccaacgggcgatctgtccacagaagattttttggtaaaaaaatcgaaagaaggtttggaa
gagcgccttaaatttctttttcccgatgaaaaagtgcgtcaagcacgtcgccccgaatat
gatgaacgtttacaagtagaattagacgtgattaaccaaatgggttttccgggctatttc
ttgatcgtgatggagtttattcagtggtcgaaagataacgatattcctgtcggtccagga
cgtggttccggggcaggatcgttagtggcgtatgcattaaaaattaccgatcttgatccg
ctagaatttgatttgctttttgagcgtttcttgaacccagagcgagtctccatgcctgac
tttgacgtggatttttgtatggatggtcgcgatcgcgtgattgatcatgtggcagaaacc
tatggtcgtggtgcagtatctcagattatcactttcggtaccatggcagcaaaagccgtg
atccgagatgtggggcgtgtacttggtcatccttatggttttgtggatcgcatctcaaaa
ttaattccgcctgatcccggcatgaccttggcaaaagcatttgccgcggagccacaatta
caagcagtatacgactccgatgaggaagtcaaagccttgattgatatggcgcgcaagctt
gaaggagtcacccgcaatgccggtaagcacgctggaggcgtggtaatttccccagggtta
attactgatttctcgccgctttattgtgactctgaaggtaaacatccagtcacccatttt
gataaaaatgatgtggagtatgccggtctggtgaagtttgactttttaggtttacgcaca
ctgaccattatcaaatgggcattagacatgattaatacgcgtcttgccaaagaaggcaaa
ccgcctgtggatattgccacaatcccgttagatgatcctgcttcttttgaattattaaaa
cgttcagaaaccaccgccgtattccagctcgaatcgcgtggtatgaaggatttgatcaaa
cgtcttcagcctgactgttttgaggatattatcgcgttagtagcattgttccgtcctggt
ccgttagagtcaggcatggtacaaaactttattgatcgtaagcatggcaatgaagtagtg
gcgtatcccgatccagaatatcaacacgacagtttaaaaccgattttagaaccgacttat
ggcgtaattgtatatcaagaacaggtcatgcagattgcccaagaattggctggatatact
ctcggtggggcggacttattacgtcgtgcgatggggaagaaaaagccagaagaaatggca
gcacaacgtgaaatttttgagaaaggcgcgattcaaaaaggagtggatggcgagttagcc
atgaaaatctttgacttggtggaaaaattcgcaggttatggctttaataaatcccactct
gcggcttatgctttagtgtcttatcaaaccctgtggttgaaaactcattatcctgccgag
tttatggcggcggtaatgacatcagagatggataacaccgataaaattgtcggcttatac
gatgaatgtttacgtatggggttaaaagtcgctccgccagatattaacaccggtaagcat
catttcagcgtgaatgaacatggcgaaattgtgtatggtattggtgcgattaaaggggtg
ggagaaggacccattgaagcgttaatttcagcccgtgagcaaggcggcattttcaaagat
ttatttgatttatgtgctcgagtcgatttgaaaaagatcaatcgtcgtacttttgaaagt
ctgattttatctggtgcgtttgataaattaggtccacaccgtgccgcgttatcgaaaaat
cttgaagatgcgttaaaagcctccgatcagcacgcgaaagatgcggcaatggggcaagcg
gatatgtttggtgtgctgactgaaagtcatgaagacgtggaaaaagcgtatgccagtacg
ccacgttggagcgagaaagtaattttggaaggggaacgtgaaacccttgggttatattta
agtagccatcctattagtccgtatttgaaagagttagcgcattacagtgctacgcggtta
aaagatttagtaccgaattctcgtggacaaatgagtacggtcagtgggttacttgtctca
tctcgttttgctgtaaccaagaaaggcaatcggcttggcatcgctacactagatgatcgt
tcagggcgattagatatcacgttatttggtgaagccttggataaatatgcagacaaatta
caaaaagatacggtgatcattgtatcagggcaagtcagttttgatgagttttcgggtgga
ttaaaaatgtcagttcgtgaactgatgagcttagatgaagcgcgtagtcgctatgcgaaa
agtttggcgatatgtttatctgaggaaaacatgaaaccgacatttattcgtgaattgaaa
gcgttattaacaccttatagtggcggaaccttacctatctatgtttattatgcgagtaca
gcggggcaatgtcgtgtcaaaatgggagtacagtggtctgtgaatccgaccgatcaatta
tttactgaactggctgaaaaattaggtgaaaatgcagtggagttagagtttcaatcatga
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