Pasteurella multocida 36950: Pmu_13940
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Entry
Pmu_13940 CDS
T01729
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pmp
Pasteurella multocida 36950
Pathway
pmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pmu_13940 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmp03400
]
Pmu_13940 (uvrA)
DNA repair and recombination proteins [BR:
pmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pmu_13940 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pmu_13940 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_23
AAA_25
NACHT
nSTAND3
DnaJ_CXXCXGXG
Viral_helicase1
cobW
ScfRs
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
AET16278
LinkDB
All DBs
Position
complement(1500372..1503203)
Genome browser
AA seq
943 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRC
PNHDVPLAAQTISQMVDKVLSLPEESKMMLLAPVVKERKGEHVKLLEQIAAQGYIRARID
GEICDLSDAPKLELHKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAVVASMDEP
ETEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSI
SLASGAVKGWDRRNFYYYQMLTSLAKHYEFDIESPFEALPKKIQQIILNGSGKEEIEFQY
MNDRGDVVVRHHAFEGILNNMARRYKETESLSVREELAKNISTCPCHDCGGSRLRQEARH
VYIGSTTLPDVAEKSIGETLHFFSELHLSGQRAQIAEKILKEIKERLQFLVNVGLDYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLLHLRNLGNT
VIVVEHDEDAIMAADHIIDIGPGAGVHGGQIVAEGSAKVIMANPHSITGKFLSGVEKIEI
PAKRTALDKKKMLKLEGATGNNLKSVNLAIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN
ALNRAENTQFAPYQSISGLEFFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
SRARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCEQCKGKRYNRETLEIRY
KGKTIHQVLEMTVEEAREFFDAIPQIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYVLDEPTTGLHFADIKQLLTVLHRLRDQGNTIVVIEHNLDVIKTADW
IIDLGPEGGNGGGQIIATGTPEQVAEVKGSHTARFLKTLLQKR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaggtacgtggggcgagaacccataatttaaaaaatattaatttaact
attcctcgtgataaattaattgtgattacgggattatcgggatcaggtaaatcttcttta
gcctttgataccctgtatgctgagggacaacgccgttatgtagaatccttgtcggcatat
gcacgtcaattcttatccctaatggaaaagccggatgtggatcatattgaaggattatcg
ccggcgatttctattgaacaaaaatctacctcacataatccgcgttcaacggtgggtaca
gtcaccgaaattcatgattacttacgtcttctttttgctcgagtaggagaaccgcgttgt
ccgaatcatgatgtgcctttagcagcacaaaccattagccagatggtggataaggtattg
agtttgcctgaagaaagcaaaatgatgttgctggcgccagtggtgaaagaacgtaagggt
gaacatgttaaattattagagcaaattgccgcccaaggttatattcgggccagaattgac
ggtgaaatttgtgatttatctgatgcacctaaattagaattacataaaaaacatactatt
gaagtggttgtggaccgttttaaagtgcggtctgatttagccacaagattagccgaatcc
tttgaaacagcattggaattatctggtggcaccgctgtagttgcttccatggatgagcct
gaaacggaagaattggtcttttcggctaattttgcttgtccacattgtgggtattctgtc
ccagaattagaacctcgtttattttcttttaataatcccgccggggcgtgtccgacttgc
gatggcttaggtgtgcaacaatattttgatgaaaaacgcgtggtgcaaaacccgagtatt
tcgttagccagtggcgcagtaaaaggctgggatcgtcgtaacttctattactaccaaatg
ctcacctccttagcgaagcattatgaatttgatattgaatcaccttttgaggcactgccg
aaaaaaatccagcagattattttaaatggttcaggtaaggaagaaattgagtttcaatac
atgaatgatcgcggcgatgtagtcgtgcgtcatcatgcatttgaaggcattctaaataat
atggcgcgccgttataaagaaacggaatcgctgtctgtgcgtgaagaattagcgaaaaat
atcagtacctgtccttgccatgattgtgggggttcacgtttacgtcaagaggcacgtcat
gtgtatattggcagcaccactttacctgatgtggcagaaaagagtattggcgaaacgttg
catttctttagtgaattgcatttaagcgggcaaagagctcaaattgcagagaaaatctta
aaagaaattaaagagcgcttacaattcttagtcaatgtagggttggattatctttccctt
tctcgttcagcagaaaccttgtctggtggggaagcacagcgaattcgtttagccagtcaa
attggtgcgggtttagtgggggtgatgtatgtgctagatgagccgtctattggtttgcat
caacgtgataatgagcgattactgaatacattgcttcacttacgtaacttagggaacacc
gtgattgtggtagaacatgatgaagatgccattatggcggcagatcatattattgatatt
ggtcccggggcaggagttcatggtgggcaaattgtggcagaaggttcggcaaaggtgatt
atggctaatccacactcaattacggggaaatttttatctggggtcgagaaaatcgaaatt
cccgcaaaacggaccgcacttgataagaaaaaaatgctgaaattagaaggggcaacgggg
aataatctgaaatcagtgaatttagccattccagtaggattgtttacctgtgtgacaggt
gtttcggggtcagggaaatcgaccttgattaatgatacgttgttcccattagcacaaaat
gccttgaatcgtgcggaaaatacgcaatttgcgccttatcaatccatttcgggtttggaa
ttttttgataaagtaattgatattgaccaaagtccaattggtcgtacaccgcgttcgaac
cctgccacttatactggcttatttacgccgattcgagaattatttgcgggcgtgcctgag
tcgagagcccggggttataatcccggacgttttagttttaatgtacgcggtggacgctgt
gaggcctgtcaaggcgatggtgtgattaaagtagagatgcactttttgcccgatgtgtat
gtgccttgtgagcaatgtaagggaaaacgttataatcgagagaccttagagatccgttac
aaaggtaaaacgattcatcaagtgttagaaatgacggtagaagaagcgcgcgagtttttt
gatgcgattccgcagatcgcccgtaaattacaaactttaatggatgttggtttatcctat
attcgtttaggacaatcttcgaccacgttatcgggtggggaagcgcaacgagtgaaatta
gcaacggagctttcaaaacgtgatacagggaaaactttgtatgtattagatgaaccgacg
acaggtttacattttgctgatattaaacagctattaacagtcttgcatcgtttacgtgat
caaggcaatacgatagtggtgattgagcacaatttagatgtgatcaaaacagccgattgg
attattgatttaggtcctgaaggggggaatggcggtggacaaattattgccacaggcaca
ccagaacaggtcgctgaagtgaaaggttcacataccgcacgcttcttaaaaacgctttta
caaaagcgctaa
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