Pasteurella multocida 36950: Pmu_14950
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Entry
Pmu_14950 CDS
T01729
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmp
Pasteurella multocida 36950
Brite
KEGG Orthology (KO) [BR:
pmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmp03021
]
Pmu_14950 (rapA)
Transcription machinery [BR:
pmp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pmu_14950 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
COG2_N
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AET16375
LinkDB
All DBs
Position
1606999..1609902
Genome browser
AA seq
967 aa
AA seq
DB search
MTFAVGQRWMSESENNLGLGLIVAIDMRTVTILFPASEEQRIYALNSAPLTRVLFQIGDE
IVHHEGWKGNVLDILENNGVAFYLLKRQDNGEEITIQERDIAHQMTFSKPQDRLFTTQID
RNEHFTLRYQALTHQQAQFQSPLRGLRGIRAGLIPHQLHIAREVGQRTAPRVLLADEVGL
GKTIEAGMILQQQLFAEKVERVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCADFEDP
ASALWINPFSTESQIICALDWLCEKPKRVEQLLEAGFDMLIVDEAHHLGWSEHNPSLEYQ
LVEQLARQIPAVLLLTATPEQLGQESHFARLSLLDPDRFYDYQAFVQEQQQYQPVADAVQ
SLLADKPLSTVEKNHIADLLSEQDVEPMLKVIDSQAHDEQKALARQELIDNLIDRHGTSR
VLFRNTRQGVKSFPHRTYNQITLELPKQYNNAANVLAMLGEKSENDSFYPEQMFQKLNPD
ARWWEFDPRLAWLITFLKNHREEKVLVICRHANTAIQLEQALREKEAIRAAVFHEKLSIV
ERDRAAAYFAQQEDGAQVLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIG
QSRDIQIHVPCFADTAQVVLARWYHEGLNAFEETCPMGMTLFETHQTQLNKFLQKPTALE
GFAEFVSLTRKQQHELKQALEKGRDRLLELNSNGGEQAQQLATDIAEQDSTTELVNFTLN
LFDIIGVDQEDLGEKSIVITPASNMLVPDFPGLKEEGATVTFDRQLSLAREDVEFMSWDH
PLIRHGIDLITSGDIGKSAVSLLINKALPAGTLLLEMIYVVEAQAPKGLQLTRFLPPTPI
RLLLDQKGNNLAEQVSFNALQKQLKPIGKNMANKVVKMVRPNIEQLVKLSEQKIVAQAQQ
IIHNTQQLADQTLSAELNRLTALQAVNKNIRQDEVDALENIRSQSLAQLQQATWRLDSLR
VIVSNKE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgcagtcggtcaacgttggatgagtgaaagtgagaataatctcggcttaggt
ttaattgtcgccatagatatgcgcactgtcaccattctatttcctgcttctgaagagcaa
cgtatttatgctttaaactctgcgcctttaacgcgcgtcttatttcaaattggcgatgaa
attgtgcatcatgaaggctggaaaggtaatgtcttggacattcttgagaataacggtgtg
gcgttttatttactcaaacgacaagataacggcgaagaaatcacgattcaagaaagggat
attgctcatcaaatgacctttagtaagccacaagatcgcttatttaccacccaaattgac
cgtaatgaacatttcaccctacgttaccaagctctgactcaccaacaagcccaattccaa
tcgcctttacgtggcttacgcggcattcgtgccggcttgattccacaccagttacatatt
gccagagaagtaggacagcgtaccgcccctcgtgtgttgctcgctgatgaagtgggatta
ggcaaaaccattgaagcaggtatgattttacagcaacaattgtttgctgaaaaagtggaa
cgggttttaatcattgtgccggaaaccttgcaacatcaatggctcgtggaaatgctacgc
cgttttaacttgcactttgctttatttgatgaggaacgctgtgccgattttgaagatcct
gcttctgctttatggattaacccatttagcacggaatcacagattatttgtgccttagat
tggctatgtgaaaaaccaaaacgtgtcgaacagctcctcgaagcgggctttgatatgctg
attgtggatgaagctcaccaccttggctggtcagaacataacccaagtttggaatatcaa
ttagtcgaacagcttgcacgtcaaattcccgcggtgctcttgctgaccgccacgccagaa
cagctcggacaagaaagtcattttgcccgtttaagtttgctggaccccgatcgtttctat
gattatcaagcctttgtacaagaacagcaacagtaccaacctgttgccgatgcggtgcaa
agtttattggcggataaacccttaagtacggtggaaaaaaaccatattgctgatttgtta
tccgagcaagatgtcgaaccaatgttaaaagtgatcgactcacaagctcacgacgaacaa
aaagccctggcgcgtcaagagcttatcgacaacctgattgatcgccatggcacaagccgt
gtgttattccgcaataccagacaaggggtgaaaagtttcccacatcgtacttacaaccaa
attacccttgagttgccaaaacaatacaataatgcggcgaatgtgttagcgatgttagga
gaaaaaagcgaaaacgattctttttacccggaacagatgttccaaaaactcaatcctgat
gctcgctggtgggaatttgatcctcgtctagcatggttaattaccttcttaaaaaatcac
cgagaagaaaaagtgttggtgatttgccgacatgcgaataccgccattcaattagaacaa
gccttgcgtgaaaaagaagctattcgtgcggcggttttccatgaaaaactcagcattgtg
gagcgtgatcgcgcagcagcctattttgctcaacaagaagacggggcacaggtattactc
agctcaagcattggttcggaagggcgcaacttccaatttgcgagtcatttagtgctgttt
aacttgcctgatgatccggatctcttagaacaatgtatcggtcgtttggatcgtattggt
caaagtcgtgatattcaaattcatgtgccttgctttgctgacaccgcccaagtggtactt
gcgcgttggtatcatgagggcttaaatgcctttgaagaaacttgcccaatgggtatgacc
ttgtttgaaacacatcaaacacagctcaataaatttttacaaaaaccgaccgcacttgaa
ggctttgcagaatttgttagcctcacacgcaaacagcaacatgaactaaaacaggcttta
gaaaaaggacgtgatcgcttattagaactgaactccaacgggggcgaacaagcgcaacag
ttggcaacagatattgctgaacaagatagtacgacagaactggtgaacttcactttaaat
ctgtttgatattattggcgttgatcaagaagatttgggcgaaaaatccattgtgatcaca
ccagcaagtaatatgcttgtgcccgattttccgggcttaaaagaagaaggcgcaactgtc
acctttgaccgtcaactttcactggcacgcgaagatgtcgagtttatgagctgggatcac
ccactcattcgtcacggtattgatctgatcacttcaggtgatatcggcaaaagtgcggtc
agtttattaattaataaagccttgccagcagggacgttactgttggaaatgatttatgtg
gtggaagcacaagcaccgaaaggcttacagcttacccgtttcttaccacctacaccaatc
cgtttattattggatcaaaaaggcaataacttagcggaacaggtgtcgttcaatgcatta
caaaaacagttaaagccgattggcaaaaatatggcaaataaagtggtgaaaatggtgcgt
ccgaacattgagcagttagtcaaactcagtgagcaaaaaatcgttgcacaagcacaacaa
attatccacaatacacaacagcttgcagatcagacattaagtgcagaattaaaccgttta
acggcgttacaagcagtgaataaaaacattcgccaagatgaagtcgatgcactcgaaaac
attcgcagccagtccctcgcccagctacaacaagcaacctggcgtttagacagcttgcgt
gtgattgtgagtaacaaagaataa
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