Paenibacillus mucilaginosus 3016: PM3016_1590
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Entry
PM3016_1590 CDS
T01757
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03030
DNA replication
pmq03430
Mismatch repair
pmq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PM3016_1590
03430 Mismatch repair
PM3016_1590
03440 Homologous recombination
PM3016_1590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmq03032
]
PM3016_1590
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_1590
Enzymes [BR:
pmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PM3016_1590
DNA replication proteins [BR:
pmq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PM3016_1590
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PM3016_1590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AFC28511
UniProt:
H6N9Y3
LinkDB
All DBs
Position
1792358..1796320
Genome browser
AA seq
1320 aa
AA seq
DB search
MGDFVHLHVHSEYSLLDGAARIETLVSRAADLGMTSLALTDHGVMYGAIPFYKACRERGI
KPIIGCEVYYTSGSLKQKGTRQDQPIYHLILLAKNLQGYQNLMKLVSVAHLEGYHYKPRI
DPEHLRKYSEGLICTSACLGSEVSQHLLHGRYDDAKAAAERYRDIFGEDFFLEVQDHGLT
EQKKVNQDLIRLGRETGIPLVATNDVHYVYEPDHAMQDILICIGTGKTVEDEDRLRIHSS
QLFLKSAEEMGRLFPHIPEAIENTLVIADRCGLELEFGRSILPQFDPIPEGLTAGDYLTQ
LCRTGLQERYAPLSEWGDEAWRRNVEARLDYELGVIERMGYSDYFLIVWDFIRFAHEEGI
VTGPGRGSSAGSLVAYVLKITDVDPIRYNLLFERFLNPERVSMPDIDIDFSDLRRDEVID
YVVRKYGRDRVAQIITFGTMAAKAAVRDVGRALNLPYNDVDKAAKLIPGQLGMTLEAALR
SSPELKALADRQPKTAELLEMAMKVEGMPRHASTHAAGVIISREPLTQYVPLQEGTEQTA
LTQYPMEHLESIGLLKMDFLGLRTLSIIERSLEWIRERTGRTIDWKGVSMEDPLTYEMLG
RGDTTGVFQLESPGMRRVLRELRPSGFEDIISVLALYRPGPMEFIPQYIRCKHGQQEVEY
PHPVLEGILKDTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKREVLDEERAHFV
EGSRGQGYTEAEANRVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPVDFMASMLA
AVTGSHHKVAEYSDDCRKMGIAVLGPDVNESGVLFTPVGAHRTADGAASGKMEAPADQEG
VRQESASGHGAIRFGLAAIKNVGTNAIESIIKERRSGPYQSLIDFCRRIDLRVCNKRVLE
SLIQAGALDSLPGHRSQLLAMLEDAVDAAVKWRKDRDDLQLVLDGFVEEVSWEVEYPAVA
PYSMTQKLELERELLGLYISGSPLDDYEDVLRRMEPDSLAQLPQYPDGSEVKVAGLVMSS
KTIVTKKGQPMAFMELEDRVGKSEVVLFPEVWKRAAPVVQKGRPVLVLAKLQLGDEDFKL
LADQVVALDDPQLEQKAAKPAGGGYARGGAGRSTPAAGRPPQAAAAAGRTAAPAGGPPQG
ARPGSSGAAAAPQRSAAGSSGAAAAPQRPAAGSSGAAAAPQRSAAGSSGAAAAPQRSAAG
TAPRQAPAAPASGRTPAAQPAPRPAAPARGQAGPGGSAPAPRTAAVQRVYMRISPKHEEP
AVLAELKRLITEHGGPLPVVLYYESSQKTLGLSDQYQVKPSPELFHRIEELLGKDSVRVK
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattttgtccatttgcatgtgcacagcgaatacagcctgctggacggcgccgca
aggattgagaccttggtgtcccgtgcggcggaccttggcatgacttctttggcgctgacg
gaccatggggtcatgtacggggcgattcctttctacaaagcgtgcagggagcgggggatc
aagccgatcatcggctgcgaggtctattacacctccggctccctgaagcagaagggcacg
cggcaggaccagccgatctatcacctgatcctgctggcgaagaacctgcagggctatcag
aatctaatgaagctggtgtcggtggcgcaccttgaaggctatcattacaagccgcgcatc
gacccggagcacttgcgcaagtacagcgagggcctgatctgcacgagcgcctgtctcggc
agcgaggtgtcgcagcatctgctgcacggcaggtatgacgacgccaaggcggcggcggag
cggtaccgggacatcttcggggaggacttcttcctggaagtacaggaccacggcctcacc
gagcaaaagaaagtcaaccaggacctgatccgcctcggccgcgagaccggcatcccgctc
gtggctacgaacgatgtgcattacgtctacgagcccgatcatgcgatgcaggatatcctg
atctgcatcggaacgggcaagacggtcgaggacgaggaccgtctgcgcattcactcctcc
cagctgttcctgaagagtgcggaggagatggggaggctgttcccgcatatccccgaggcg
atcgagaacacgctggtcattgccgaccgctgcgggctcgagctcgaattcggccgctcg
atactgccgcagttcgatccgattccggaagggctgacggcgggcgattaccttacgcag
ctctgccgtacgggcctgcaggagcggtatgccccgctttccgagtggggggatgaggct
tggcgacgcaatgtggaggcccggctggactacgagctcggtgtcatcgagcggatgggg
tactcggattattttctgatcgtatgggactttatccgcttcgcccatgaggaaggcatc
gttacgggcccgggacggggatcgtctgcgggcagccttgtggcctacgttctcaagatt
accgacgtcgacccgatccgctacaacctgctcttcgagcggttcctgaatccggagcgg
gtgtccatgcccgatatcgacatcgacttcagcgacctgcgccgcgacgaggtcatcgac
tatgtcgtgcgcaagtacgggcgggaccgcgtcgctcagatcatcacgttcggtacgatg
gcggcgaaggcggccgtacgggacgtgggccgggcgctgaacctgccgtacaacgacgtg
gacaaggcggcgaagctgattcccggccagctcggcatgacgctcgaggcggcgctgcgc
tcctcgccggagctcaaggcgctggccgaccgccagccgaagacggcggagctgctggag
atggcgatgaaggtggagggcatgccgcgtcacgcctcgacgcacgccgcaggcgtcatc
atctcgcgggagccgttgacgcagtatgtgccgctgcaggaaggcaccgagcagaccgcg
ctgacccagtatccgatggagcatctggagtcgatcgggctgctcaagatggattttctc
gggctgcgcaccctgtccatcatcgagcgctcgctggagtggatccgcgagcggacgggc
cggaccatcgactggaagggcgtatcgatggaagacccgctgacctacgagatgctcggc
cggggagacacgaccggcgtcttccagctcgagtcgccggggatgcgccgggtgctcagg
gagctccggcccagcgggtttgaagacattatctcggttcttgcgctgtaccgtccgggt
ccgatggaattcattccgcagtatatccgctgcaagcacggccagcaggaggtggagtac
cctcatcctgtgctggaagggattctgaaggatacgtacggcatcatcgtctaccaggag
cagatcatgcagatcgcttccctgatggcgggcttctcgcttggcgaagcggacctgctg
cgcagggccgtatcgaaaaagaagcgggaggtgctcgacgaggagcgcgcccacttcgtg
gaaggcagccggggccagggttacaccgaggcggaagcgaaccgggtgtacgatatgatc
gtacgcttcgcggactacggcttcccgcgggcgcatgcaacggcttacggggtgctcgcc
ttccagacggcgtacctcaaggcgcattacccggtggactttatggcttccatgctggcg
gccgtgacgggcagccaccacaaggtcgccgaatactcggacgactgccgcaagatgggc
atcgccgtgctcggcccggacgtcaacgagagcggcgtgctgttcacgccggtgggggcg
caccgtacggcggacggcgctgcttccgggaagatggaagcacccgccgatcaggaaggc
gtccgtcaggaatccgcatccggtcatggggcgatccgcttcggactggccgccatcaag
aatgtgggcacgaacgcgatcgaatcgatcattaaggagcggcggtcgggcccgtaccag
agcctgatcgacttctgccggcggatcgacctgcgcgtgtgcaacaagcgcgtgctggaa
tcgctgattcaggcgggggcactcgattcgctgcccggtcaccgctcccagctgctggcg
atgctcgaagacgccgtcgatgcggccgtcaagtggcgcaaggaccgcgatgatctgcag
cttgtcctcgacggtttcgtggaagaggtgtcctgggaggtggaatatcccgccgtggcg
ccttattccatgacccagaagctcgagctggagcgggagctgctcggtctgtacatctcc
ggcagcccgctggatgactatgaggacgtgctccgcaggatggagcccgattcgctggcc
cagcttccgcagtacccggacggaagcgaggtcaaggtggctgggcttgtcatgagcagc
aagacgatcgtgacgaaaaagggccagccgatggccttcatggagctggaggaccgggtc
ggcaagtccgaggtcgtcctcttccccgaggtgtggaagcgggcggccccggtggtgcag
aagggccgtcccgtgctcgtgctggcgaagctgcagctcggcgacgaggacttcaagctg
ctcgccgaccaggtggtggcgctggacgacccgcagctcgagcagaaggccgcgaagccg
gcgggcggcggctatgcccgcggcggcgccggccggagcacgcctgcggccgggcgtccg
ccgcaggcagctgcggctgccggacgcacggcggcgccagccggcggcccgccgcagggg
gcgcgccccggcagctccggcgcagcagccgcgccccagcgctccgccgcaggcagctcc
ggcgcagcagccgcgccccagcgccccgccgcgggcagttccggcgcagcagccgcgccc
cagcgctccgccgcgggcagctccggcgcagcagccgcgccccagcgctccgccgcaggc
acggctccgcgccaagcgcctgcggccccggcgtccggccgcacgcctgctgcgcagcct
gcgccccgcccggcggctccggcccgcggccaggccggcccgggcggcagcgccccggct
ccgcgcacagcggcggtgcagcgcgtgtacatgcgcatctcgccgaagcacgaggagccg
gcggtgctcgccgagctgaagcggctgatcacggagcacggcgggcctctgccggtggtg
ctctattacgagagctcccagaagacgctcgggctcagcgaccagtatcaggtgaagcct
tcaccggagctgttccaccgcatcgaagagctgctcggcaaagacagcgtgagagtgaag
tag
DBGET
integrated database retrieval system
