Paenibacillus mucilaginosus 3016: PM3016_165
Help
Entry
PM3016_165 CDS
T01757
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03420
Nucleotide excision repair
pmq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PM3016_165
03430 Mismatch repair
PM3016_165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_165
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PM3016_165
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PM3016_165
MMR (mismatch excision repair)
Other MMR factors
PM3016_165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
DUF2067
ResIII
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFC27147
UniProt:
H6NTK0
LinkDB
All DBs
Position
173959..176274
Genome browser
AA seq
771 aa
AA seq
DB search
MINQPIDIFQAVNKLNPQQKQAVETVEGPLLIMAGAGSGKTRVLTHRIAYLIATRKAAPW
SILAITFTNKAAREMQERVSSLVGPQGGDIWVSTFHSMCVRILRRDISRIGFTSNFSILD
SGDQLSVIRNIMKEQNIDSKKFEPKAVQAAISNAKNELQTPEMFERKIGDYFDGIVAKVY
SSYQRKLRANNSLDFDDLIMTTIELFKQVPEVLDFYQNKFQYIHVDEYQDTNRAQYMLCR
MLADKHKRICVVGDSDQSIYKWRGADISNILDFEKDYPNATTILLEQNYRSTSNILNAAN
KVIANNTGRKVKNLWTDKAEGDKIKVYQADSEHEEGYFITGEIRRNLDNGRRYKDHAILY
RTNAQSRVIEEILIKSDIPYQIVGGVKFYDRKEIKDILAYLRLISNPDDDISFARVVNVP
KRGIGDTSLDRLAGAAAQFGVSLFAMLENVDSIEMAAKAKNALADFRDMIENLHRMVEYL
SVTELTEKMLELSGYRDELRRENTIESQARLENIDEFLSVTMDFEKRNEDKSLVSFLTDL
ALIADIDSMNADPEEGKQGVVLMTMHSAKGLEFPVVFIMGLEEGVFPHSRAVADNEELEE
ERRLAYVGITRAEEQLFLTCARMRTLFGRTAQNAPSRFLRELPPELLEPARPGGFGRGGG
AGFGSAGGERRFGSAGGFGGSPAAAAARTPVSFRGGGAAPATSATTGGASAASAPKSLDF
AMGDKVSHGKWGTGTVVALKGSGDDTELQIAFPAPVGVKRLLAKFAPITKV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccaacctatcgatatatttcaggcggtcaataagctcaatccccagcagaag
caggcggtggagacggtcgaaggacctctgctgatcatggccggcgcagggagcggcaag
acgcgcgtgctgacgcaccgcatcgcttatctgattgcaacgcgcaaggccgcgccttgg
agcatcctcgccatcacctttacgaacaaggccgcaagggagatgcaggagcgtgtgagc
tccctggtcggcccgcagggcggcgacatctgggtatccaccttccactccatgtgcgtc
cggattctgcgacgcgatatttcgcgcatcgggttcacctcgaatttctcgatcctggat
tccggcgaccagctctccgtgatccgcaacatcatgaaggaacagaacatcgactcgaag
aaattcgagccgaaggcggtgcaggccgcgatctccaacgcgaagaacgagctgcagacc
ccggagatgttcgagcggaagatcggggattattttgacggcatcgtggccaaggtctac
tcttcctaccagcgcaagctacgggcgaacaactcgctggacttcgacgatctcattatg
acgacgatcgagctgttcaagcaggtcccggaagtattggacttctaccagaacaaattc
caatacattcacgtggacgagtaccaggatacgaaccgggcgcagtacatgctctgccgg
atgctggccgacaagcacaagcggatctgtgtcgtgggcgacagcgatcagtcgatctac
aagtggcgcggcgcggatatttccaatattctcgacttcgagaaggactatccgaatgcg
acgacgatcctgctcgagcagaactaccgttcgacctccaacatcctgaacgcggcgaac
aaggtcattgccaacaatacggggcgcaaggtcaagaatctgtggaccgacaaggcggaa
ggggacaaaatcaaggtctaccaggccgattccgagcatgaggaaggctacttcatcacg
ggcgagatccgccgcaacctggataacggccgccgctacaaggatcatgcgatcctgtac
cgtacgaacgcccagtcccgtgtcatagaggaaattctcatcaagtcggatatcccttac
cagatcgtcggcggcgtgaagttctacgaccgcaaagagatcaaggacattctcgcttac
ctgaggctgatttcgaatccggacgacgatatttcctttgcccgtgtcgtcaatgtgccg
aagcggggcatcggcgatacgtcgctggaccgcctggcgggcgccgcggcgcagttcggc
gtctcgcttttcgctatgctggagaacgtggattccatcgagatggcggcgaaggcgaag
aatgcgctcgcggatttccgcgatatgatcgagaatctgcaccggatggtggaatacctg
tcggtcaccgaactcacggagaaaatgctggagctctccggctaccgcgacgagctgcgg
cgcgagaacacgatcgagtcccaggcccgcctcgagaacattgacgagttcctgtccgta
acgatggactttgagaagcgcaatgaagacaaatcgctggtatccttcctgacggacctg
gcgctgattgcggatatcgactcgatgaacgccgatccggaagaaggcaagcagggcgtc
gtgctcatgacgatgcacagcgccaagggcctcgaattccccgttgtctttattatgggc
cttgaggaaggcgtatttccgcattcccgtgcggtcgccgacaacgaggagctcgaagag
gaacgccgcctcgcgtacgtgggcatcacccgtgccgaagagcagctcttcctcacgtgc
gcgcggatgcgcacgctgttcggccggacggcgcagaatgcgccgtcgcggttcctgcgc
gagcttccgccggagctgcttgagcccgcccgtccgggcggcttcgggcgcggcggcggc
gcggggttcggctccgccggcggcgagcgccgcttcggcagtgccggaggcttcggcggc
tcgccggccgcggcagcggcccgtacgccggtgagcttccgaggcggcggggcggccccg
gccaccagcgcaaccacaggcggcgcgtccgcggcctccgcgccgaagagcctcgacttt
gccatgggtgacaaagtctcgcacggcaaatggggaacggggaccgttgtcgcactaaag
ggctcgggggatgacaccgagctgcagatcgctttccccgccccggtgggcgtgaagcgg
ctgctcgcgaagttcgcgccgattaccaaggtgtaa
DBGET
integrated database retrieval system
