Paenibacillus mucilaginosus 3016: PM3016_3019
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Entry
PM3016_3019 CDS
T01757
Name
(GenBank) Hup
KO
K03530
DNA-binding protein HU-beta
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmq03032
]
PM3016_3019
03036 Chromosome and associated proteins [BR:
pmq03036
]
PM3016_3019
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_3019
DNA replication proteins [BR:
pmq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PM3016_3019
Chromosome and associated proteins [BR:
pmq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PM3016_3019
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PM3016_3019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
HU-CCDC81_euk_1
RsbRD_N
DUF1512_C
Motif
Other DBs
NCBI-ProteinID:
AFC29887
UniProt:
H6NAG2
LinkDB
All DBs
Position
3456514..3456786
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLINKVSESTELSKKDATKAVEAVFEAISEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKIPAFKPGKALKDGIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccgatttgatcaacaaggtgtccgaatccaccgaactgtccaagaaagac
gctaccaaagcggtagaggcggtattcgaagccatctccgaagcgctgcagagcggggac
aaggttcagctggtcggcttcggcaacttcgaagttcgtgagcgttccgcccgcaaaggc
cgcaacccgcaaaccggcgaagagatcgagatcccttcgagcaagattcctgctttcaag
cctggcaaggcgctgaaggacggcatccagtaa
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