Paenibacillus mucilaginosus 3016: PM3016_3180
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Entry
PM3016_3180 CDS
T01757
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PM3016_3180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_3180
Enzymes [BR:
pmq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PM3016_3180
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PM3016_3180
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PM3016_3180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFC30035
UniProt:
H6ND74
LinkDB
All DBs
Position
3623834..3624643
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEMENYRILLSGRITGRTITGAEIGREKSINVAPERFRMDVIGSSVRVIERRAKHL
LFHLTTGNVLVLHLMIGGILYYGRLEDQPDRTIQVRISFGDEHLFFIGLRLGYLHLHTPE
ETAELMKKLGPDPFDPELTEEAFEQRLRPRKGTLKSNLVDQSVLAGIGNCYSDEICFMAK
LLPSRRPATLSTEEYRKLHASMREVLTEATRYGGYMEMPLYPGDPLTGGFDARCRVYDAE
GKPCERCGQPIVRQEVSSKKSFCCLNCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaaatggagaattaccgtattctgctcagcggccgcatcacgggc
cggacgatcaccggcgccgagatcggccgggagaagtccatcaacgtggcgcccgagcgg
ttccgcatggatgtgatcggctcgtccgtccgtgtcatcgagcgccgtgcgaagcacctg
ctgtttcatctgacaacagggaacgtgctcgtgctgcacctcatgatcggcggcattcta
tattacggcaggctcgaggatcagccggaccgtacgatacaggtgcgcatctcatttggg
gatgagcatctgttttttattggactgcgcctcggctacctgcacctgcatacgccggag
gagacggccgagctgatgaagaagctcggacccgacccgttcgacccggagctgaccgag
gaagcgttcgagcagcggctgcgcccccgcaaggggacgctcaagagcaatctcgtcgac
cagagcgtgctggccggcatcggcaactgctacagcgacgagatctgcttcatggcgaag
cttctgccttccaggcgtccggccacgttatccactgaggaataccggaagctgcatgcc
tccatgcgggaggtgctgacggaagcgacccggtacggcggctatatggagatgcccttg
tacccgggcgatcccttgaccggcggattcgatgcccgctgccgtgtgtacgatgcggag
ggcaagccgtgcgagcggtgcggccagcccatcgtccggcaggaggtctcgtcgaagaag
tcgttctgctgtctgaactgccagcactga
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