Paenibacillus mucilaginosus 3016: PM3016_382
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Entry
PM3016_382 CDS
T01757
Name
(GenBank) Ricin B lectin
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00040
Pentose and glucuronate interconversions
pmq01100
Metabolic pathways
pmq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PM3016_382
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PM3016_382
Enzymes [BR:
pmq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PM3016_382
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFC27358
UniProt:
H6NS64
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All DBs
Position
complement(452731..454155)
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AA seq
474 aa
AA seq
DB search
MKSKSLLKVLTAASLIVSAMPLMSASAADPALVPYNLTGFSAGNTGGGSIPETDTARYKK
VYNAADLAAALKRGSGVKVVEIMNDLNLGWNELPAEAKISPFTAHSTPLTHPVLKTTGVS
KLTVDGFNGLTIFSANGAKIKHGAFVFKRSSNVIIRNLEFDELWEWDEYTKGDYDKNDWD
YVTLEENSKVWIDHCKFNKAYDGLVDVKKGTNGVTISWSTFKGDDGSAGSWVRKQIDAME
ANPSAYPMYAYLRSSAIGLTKEDIIAVAASQKKGHLVGATEFDSLNPNLQVTLHHNYYKD
IQDRMPRLRGGNAHAYNIVMDSAAAYAAKKKITTAMETALKSKGYKFGVTSNGAISTEGG
AVLVEKSEIIDVASPVRNNQTDPADSSYTGKIRVLDTLYSLNGTSFRGGSDTSGSPLAPV
PAPVIAFSWNGFSTLPYSYTAEDPATLKARLTASNGAGAGKLIWSKDNWLKTSY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagtccttgttgaaagtgcttacggccgcatcgctcatcgtctccgccatg
cccctgatgtccgccagcgcggcggacccggctcttgtcccgtacaatctgaccgggttc
tcggccggcaataccggaggcggcagcatcccggagaccgacacggcccgctacaagaag
gtatataacgcggctgatcttgccgctgcactgaagcggggctccggtgtcaaggtggtc
gagatcatgaacgacctgaacctcggctggaacgagctgccggccgaagcgaagatctcc
ccttttacagcgcacagcacgcctctgactcatcccgtgctcaagacgacaggggtgagc
aagcttacggttgacggcttcaacggactgacgatcttctcggcgaacggggccaaaatc
aaacacggcgcattcgtcttcaaacgcagctctaacgtgatcatccgcaacctggaattc
gacgagctgtgggagtgggacgagtatacgaagggcgactacgacaagaacgactgggat
tatgtcaccctggaggagaacagcaaggtatggatcgaccactgcaagttcaataaagcc
tacgacggcctcgtcgatgtcaaaaagggcacgaacggcgtcacgatctcctggtccacc
ttcaagggcgacgacggcagcgcaggcagctgggtccgcaagcagatcgacgcgatggaa
gcgaatccgtccgcttacccgatgtacgcatacctgcgcagcagcgcgatcggtctgacc
aaggaagatattattgcagttgccgcctcccagaaaaaaggccatctcgtaggcgccacc
gagttcgactccctgaatccgaacctccaggtaacgctccaccataactattacaaggat
atccaggaccggatgccgcggcttcgcggaggcaacgcccatgcgtataacatcgtgatg
gacagcgcggctgcctacgccgcgaagaagaagattacgacagcgatggaaaccgctctg
aagtccaagggatacaagttcggcgtaacgagcaacggcgccatctccaccgaaggcggg
gcggtgcttgtcgagaagtcggagatcattgacgtggccagccccgtgcgcaacaaccag
accgatccggccgacagcagctacacaggcaaaatccgggtgctcgacacgctctactcg
ctgaacggcacttcgttccgcggcggcagcgacacctcgggctccccgctcgctcctgtg
ccggcaccggtcattgctttctcctggaacggcttctccacgctgccgtacagctacacc
gccgaggacccggcgaccctgaaggccagactgacggcatcgaacggcgcaggcgccggc
aagctgatctggtcgaaggacaactggctgaagacgagctactag
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