Paenibacillus mucilaginosus 3016: PM3016_4060
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Entry
PM3016_4060 CDS
T01757
Name
(GenBank) YbbB
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmq03000
]
PM3016_4060
Transcription factors [BR:
pmq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PM3016_4060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AFC30844
UniProt:
H6NJZ1
LinkDB
All DBs
Position
complement(4792951..4794558)
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AA seq
535 aa
AA seq
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MQPDTYTRISDALGRLDDLWIKFRRASLLQEGNLMPMLTSSYYMVIPKCGESRLTLDLHT
YPLRQDAVYIAGPGQTIAIREEEGAKSQLYVLEFDIHPSGADGPAFPLLGELPIHPDPAL
LRMCEGLCGSTRSGQAVERLYGQAVFHELLYWTLTHHREELRVDSRTALEKTKAYIDTNY
EENLSMDQLARMADISPKYYGSLFKKTFGKTVTDYLTEVRINRAKQLMAQSRLRLRDVAF
MVGYQDEFYFSRMFKREVGVPPTVYLKSRRQKIAAYSAPILGQLLALGVLPYAAPLHPKW
TSYYYDNYRADIPLHLSGFRFNEDWESNVGRLAQSEVDCIITTDRLHGEEKERLERIAPV
HFIPEGAPWREQLQQIAGIVGAADEAQTWLDRYDAEARLVREKLHRQLQGEKVLIASLFK
KAFRLFPVRGMREVVCQDMRLLTPHEADEYSPGQTLSLTELSAVDADHILLNVCQETETL
QYWEELQSDVDWTNMKAVRRRRVQLISSDPWREYSAHAKERMIRDLCSRLCGNRT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgacacatacacccgcatttcagatgcgcttggccgactggacgatctatgg
atcaagttcaggagggcaagcctgcttcaagaggggaacctcatgcccatgcttacttcc
tcctattatatggtgatcccgaagtgcggcgagagccggttgaccctagatctgcatact
tatcctctgcggcaggatgccgtgtacatcgcagggcccgggcagacgatcgccatccgg
gaggaagaaggggcgaagtcccagctctatgtgctcgaattcgacatccatccttcgggg
gctgacggacctgcttttccgctgctgggcgagcttcccattcatcccgatcccgctctg
ctccgaatgtgcgaagggctctgcggctccacccgaagcgggcaggcggtggagcgcctg
tatgggcaggctgtttttcatgagctgctgtactggacgctgacccatcacagagaggag
ctgcgagtggattcaagaacggccctcgagaagacgaaggcctatatcgatacgaactat
gaggaaaacctgtcgatggaccagctggcccgcatggcggacatctcccccaaatattac
gggagcctgttcaagaaaaccttcggcaaaacggtcaccgattatttgacggaggtgcgg
atcaaccgggcgaagcagctcatggcgcagtcccgtctgcgcctgcgggatgtggcgttc
atggtcggctaccaggatgagttttatttcagccgcatgttcaaacgcgaggtgggggtg
ccgcccaccgtctatctcaagagccgaaggcagaagattgccgcttactccgccccgata
ctcggccagctgcttgcgctgggcgtcctgccctatgccgctccgctgcatcccaaatgg
acctcgtactactatgacaactaccgcgcggacattcctctgcatctgagcgggttccgc
tttaacgaagactgggagtcgaatgtaggccggctggcccaaagcgaggtggactgcatc
atcacgacggacaggctgcatggggaggaaaaggaacggctggagcgcatcgcgccggtg
catttcatcccggaaggggccccctggcgcgaacagctgcagcagatcgccgggattgtg
ggagcagcggatgaagcgcagacctggttggaccgttacgatgctgaggcccggctcgtg
cgggagaagctgcatcggcagctgcagggggagaaggtgctgatagccagcctcttcaag
aaggccttccggttgtttcccgtcaggggcatgcgggaggtggtctgccaggacatgagg
ctgcttacccctcacgaggccgacgagtattcaccgggccagactttaagcctgacggag
ctctcagccgtggatgccgatcacatcctgctgaatgtgtgccaggagaccgaaacgctg
cagtactgggaagagctccagtcggacgtcgattggacgaatatgaaagccgtgaggaga
cgccgggtgcagctgatttcgtccgatccgtggcgtgaatactccgcccatgcgaaggaa
cggatgatccgggacctctgcagccggttatgcggaaatcgtacatga
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