Paenibacillus mucilaginosus 3016: PM3016_4210
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Entry
PM3016_4210 CDS
T01757
Name
(GenBank) DNA mismatch repair protein MutS domain-containing protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PM3016_4210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_4210
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PM3016_4210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Chorion_3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFC30986
UniProt:
H6NLQ2
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All DBs
Position
complement(5001920..5003941)
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AA seq
673 aa
AA seq
DB search
MDKNMQMKVDMAGCLEYEKVKEGLLDHAKSYLGREHIRALMPVTDQGLIERWLEESAEAV
KLIEHGASVPVPALDGMETMAAGLGKGFLLTVSELGVIVKFLENTAQLKRFMSRKESIAP
QVTSYALSLYELSEIRLEIERCIRHGAIDDGASPELAKVRKKIAIAEERLKKKLESTMQR
YRSYLQEQVISMRGDRYVIPVKKEHRKLVAGSVLDESASGQTVFIEPAETASLTYELSAL
RAEESREETKVLGLLTDLVESHTQEIRLNLETIGHYDFLFAKAKYGLSIGGRTVEIGSDG
RTRILRGRHPLLGAHAVPLDFEIGESYRALIITGPNTGGKTVTLKTVGLLTMMVQSGLMV
PAAEGSRFSIFHSVLADIGDGQSLEQSLSTFSSHVKNVIRILDEAGPSALILLDELAAGT
DPGEGIGLSIAVLEELYRRGSTVIATTHFNEIKRYAEAAEGFENARMEFDVETLRPLYRL
TIGEAGRSYAFQIAAQLGMPAGIIARSKAITYGPAAAAGEAGGSSAASSSAGAGLVSLEE
ALQGPDREGAAGAGPSAGQRQQQPVRRGKREAARELQAEFEIGDCVWIHSQRRTGIVCGL
ADERGNLLILIQKEKVKINRKRLSLYIEREQLYPEGDYDMDIVFESKEVRKKRKMMSKRH
DESVMIIHPPQGE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggataagaacatgcaaatgaaagtggacatggccggatgcctggagtatgagaaagta
aaagaggggctgctggaccatgccaaatcttatttgggccgggagcacatccgggcgctg
atgccggtcacggatcaagggttgattgagcgctggttggaggagtcggcggaagccgtc
aagctgatcgagcacggcgcaagtgtcccggttcccgctttggacggcatggagacgatg
gccgcgggactcggcaagggattcctgctgaccgtcagcgagcttggggtgatcgtcaag
ttcctggagaacaccgcccagctcaagcgcttcatgagccggaaggaatccatcgctccg
caggtaacgagctatgcgctgtctctctatgagctgagcgagatccggctggagatcgaa
cggtgcatccggcacggggcgatcgatgacggagccagtccggagctggccaaagtgcgc
aagaaaatcgccatcgcggaagaacgtctgaaaaagaaactggagagcaccatgcagcgc
tatcgcagctatctgcaggaacaggtgatcagcatgcgtggcgaccgctatgtcatcccg
gtgaagaaggagcaccgcaagctcgtcgccggatcggtgctggatgagtcggccagcggg
cagacggtgttcatcgagccggccgagaccgcttcgctcacctatgagctgagcgccctc
cgggcggaggagagcagggaagagacgaaggtgctggggctgctgaccgatcttgtcgag
agccatacgcaggagatccggctgaatctggagaccatcgggcattatgattttctcttt
gcgaaggcgaagtacggcctctcgatcgggggtcggaccgttgagatcggctccgacgga
agaacgcgaatcctccgcggacgtcatccgctgctcggggcacacgcggtgccgctggac
ttcgagatcggggagagctacagggcgctgatcatcacgggaccgaacacaggcggcaag
accgttacgttgaagacggtaggcctgctgacgatgatggtccaatccggtctcatggta
ccggcggccgagggaagccggttcagcatctttcacagcgtgctcgccgacatcggggac
ggccagagcctggaacagtcgctgagcacattctcctcccacgtgaagaatgtcatccgc
attctggatgaagccggaccttccgccttgatcctgctggacgaactggcggccgggacc
gatcccggagaagggatagggctctcgatcgccgtactggaagagctgtaccgccgcggt
tcgacggtgatcgcaaccacgcattttaacgagatcaagcggtatgcggaagccgcggag
ggcttcgagaacgcacggatggagttcgacgtggagacgctgcggccgctgtaccggttg
accattggtgaagccggccgaagctacgcgttccagatcgccgcccagctcggcatgcct
gccggcattatcgcgcggtcaaaggcgatcacgtacggcccggcggccgcggccggtgaa
gcgggggggtcatcagccgcttcatcgtctgccggggcaggccttgtgtctctcgaagag
gccctgcaggggcctgatcgggaaggagctgcaggcgcggggccatcggcggggcagcgg
cagcagcagcccgtccgccgcgggaagagggaggcggcacgtgagctccaggcggagttc
gagatcggcgactgcgtctggatccattcccagaggcggaccggcatcgtgtgcggactg
gcggacgagcggggcaacctgctcatcctgatccagaaggagaaggtgaagattaaccgc
aagcggctgtcgctgtacatcgaacgggagcagctgtacccggagggcgactatgacatg
gacatcgtcttcgagtccaaggaggtgcggaagaagcgcaagatgatgagcaagcggcac
gacgagagtgtaatgatcattcatccgccgcagggagagtaa
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