Paenibacillus mucilaginosus 3016: PM3016_4405
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Entry
PM3016_4405 CDS
T01757
Name
(GenBank) lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PM3016_4405
Enzymes [BR:
pmq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PM3016_4405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
DUF6795
DUF4198
CarbopepD_reg_2
EMC7_beta-sandw
SpaA
Motif
Other DBs
NCBI-ProteinID:
AFC31171
UniProt:
H6NPY0
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All DBs
Position
complement(5237602..5239596)
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AA seq
664 aa
AA seq
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MKRLSQRNKRRGAAAGKTAASLLLAGSVLLGAVPLPAAAGAQAAQGTAADQAAEASGQGA
ELGRHKEKLALIDQGSSVTLKNSRVSVTIDKGSATVTSITYGEDSPNLLAGGGAGYYILN
YSQNGKNLKFGPKDELTYKVVAQDEEHIDIALTVDDRAVLPFSYELHFVLVKNEPGLYFY
SVVGYPEAVEGGVTIGQGRYAFRVDPNLFDSYAVDDERRGPLPAPAELEAGEEVMDASIK
LPSGEVYTKYNHIEYAGDLNVTGLYGKDLGIWLIRGSNEFVDGGPTQQRNSVHQTNTTPI
LLWHEHESHYGRGNVVPSPGWKKIYGPSFLYVNQGGNADKLWKDANRRAEAEQRKWPYRW
LDDPRYAADRRGSVKGQLTIADGRPAADAWVILADPSPDWQDQNLGYNYYIRTDSQGRFT
IPDVREGTYTLYSFVKGYFGEFRKDGITVQASKETKLPALVWTPETHGTTLWTLGTPDRT
AGEYRHGDDYHHWGLWLDYPLDFPNGVDFRMGESSERTDWNYAHPVTATPGEPAQLKVPF
NPELTPWKIRFDSDAVYPAGTKATLTFGIASSRNGSLRLNLNGTEIANLASLPGPKSDSG
MPRSAVHAFYREFTVEFDASLLKQGENVLQLTHAKNIYDANGQRTGDLYTSQMYDAIRLE
VQQP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactatctcaacggaacaaacgcagaggagccgctgccggaaagacggccgcc
tccctgctgctcgcaggcagtgtcctgctgggagccgtaccgcttcccgctgcggccgga
gcgcaggccgcacagggaacggcggcggaccaggcggcggaagcatccggccagggagca
gagctcggccgtcataaggagaagctcgccctgatcgaccaggggagcagcgtcacgctg
aagaacagcagagtcagcgtcaccatcgacaagggcagcgctaccgtgacctccattacg
tacggggaagacagcccgaacctgctcgcgggcggcggagccggctattacatactgaac
tactcgcagaacggcaagaacctgaagttcggtccgaaggatgagcttacctacaaagtc
gtggcacaggacgaagagcacatcgatatcgccttgaccgtggatgaccgtgccgtcctg
ccgttctcgtatgagctgcattttgtgctggtgaagaatgaacccggcctttacttctac
tcggtagtcgggtatcccgaagctgtagaggggggcgtcaccatcggccagggccggtac
gccttccgcgtcgatccgaacctcttcgactcgtacgccgtggatgacgagcggcgcgga
ccgctgccggcccctgcagagctcgaagccggggaagaggtgatggatgcgagcatcaag
ctgcccagcggcgaggtgtacaccaagtacaatcacatcgaatatgccggtgatctcaat
gtgacgggactgtatgggaaggatctcgggatctggctgatccggggcagcaacgagttc
gtcgacggcggtccgacccagcagcgcaactccgtccaccagacgaacaccacgccgatc
ctgctgtggcatgagcatgaatcccattacgggcgcggcaatgtggtgccttcgccgggc
tggaagaagatctacgggccgtccttcctctatgtgaatcagggcgggaatgccgacaag
ctctggaaggacgcgaaccgccgggcggaggcggagcagcgcaagtggccgtaccgctgg
ctggacgatccgcggtatgcggcggaccgcagaggcagcgtgaagggacagctgaccatc
gcggacggcaggccggcggccgatgcctgggtgattctggccgatccgagcccggactgg
caggaccagaacctcggctataactactatatccgcaccgacagccaaggccgcttcacc
attccggatgtgcgggaaggcacgtacaccctgtacagcttcgtcaaagggtacttcggt
gaattccgcaaggacggcatcacggtgcaggcatccaaggaaacgaagctgcccgctctg
gtatggactcccgagacccatggcaccacactctggacgctgggcacgccggaccggacg
gcgggcgaataccggcatggagacgactatcatcactggggattgtggctcgattacccg
ctggacttcccgaatggggtcgatttccgaatgggggagagcagtgagcggacggactgg
aactacgcccacccggtgacggcaacgccaggcgaaccggcacagctcaaggtgccgttc
aaccccgagctgacgccgtggaagatccgctttgacagcgatgcggtataccctgcaggc
accaaagcgacgctgaccttcggcatcgcgtcctcccgcaacggttcgcttcggctgaac
ctgaacggcacggagattgcgaacctggcctcgctgccgggaccgaagagcgattcgggc
atgccgcgcagtgcggtgcacgccttttaccgggaattcaccgtcgagttcgatgcttct
ctgctgaagcagggggagaacgtgctgcagctcacgcatgccaagaacatctatgacgcg
aacggccagcgcaccggcgatctctatacaagccagatgtatgatgcgatccgactggaa
gtccagcagccctaa
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