Paenibacillus mucilaginosus 3016: PM3016_5020
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Entry
PM3016_5020 CDS
T01757
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03420
Nucleotide excision repair
pmq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PM3016_5020
03430 Mismatch repair
PM3016_5020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_5020
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PM3016_5020
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PM3016_5020
MMR (mismatch excision repair)
Other MMR factors
PM3016_5020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
AAA_16
SLFN-g3_helicase
Leuk-A4-hydro_C
AAA_30
NACHT
DEAD
nSTAND3
NICE-3
Motif
Other DBs
NCBI-ProteinID:
AFC31750
UniProt:
H6NN74
LinkDB
All DBs
Position
complement(6037762..6040137)
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AA seq
791 aa
AA seq
DB search
MTIGREERVQEQQRLKAVLGEIRGRLEKLQEEAGGFKEDIVEIRKHFWDDVTINLDGAEE
VYETFASLKQQAEVLSERERGHRRMQAQVRLLRRLQESPYFGRIDFREEGRDGTAEAVYI
GTGSLLDEEGLAFLIYDWRAPVASMYYDHGPGPAAYVTPGGEIRGELERKRQYIIRDGQL
RAVFDTGLTIGDELLQHVLGGASDSRMKSIVATIQREQNRIIRSEQSRLLLVEGAAGSGK
TSAALQRIAYLLYRYRESLRADQIVLFSPNGMFSAYVSSVLPELGEDNMQQTTFQEYLDY
RLAEDFRVEDPLDSLEYVYGESEGKTEELRLSGIAVKSQASFLEALQQYTDFLGREGGMK
WRPLTFRDTVIVSGEEIDARFRALDPCQSIAGRLEQIAKELVRSAQAYMRSQLYADWVEE
EMQTLDAEAYLKAYSRLQQRKRFSEETFDDFDREYEELAKALLQEYVTPLKRWIRRLKFL
DIQGMYMALHADPLLRRAHLDPLAGNPAEVDGWCAYTVRRLEKGELPYEDAAPYLIFKES
LEGFRMNLSVRHVFVDEAQDYTPLQWAYLRRLFPRSRWTVLGDPLQGIGAHLLGVREMNH
PAVLAAPAETERIRLTRTYRSTRPIVEFTRTLLPGAEIEPFDREGPKPTLTVTGRESLAE
EIRRRTEKVREAGHRTIAILCKNERESLEAYERLRDVMEVKRIGQHGGSFEPGVLVLPAY
LAKGVEFDAVLMYDVSQERYGGERERKLLYTACTRAMHELHLFSCGEPSQLLQEAPSETY
RVRNPLDNRHQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcggcagagaagaacgggtgcaggagcagcagcggctgaaggctgtgctgggg
gagatccgcggcaggctggagaagctgcaggaagaagcgggcgggttcaaggaagatatc
gtcgagatccgaaagcacttctgggacgatgtcacgatcaatctcgacggggcggaagaa
gtgtatgaaacgttcgccagtctgaagcagcaggcggaggtgctctcggagcgggagcgg
ggccaccggcgcatgcaggcgcaggtacggctgctgagacgtctgcaggagtcgccttat
tttggccggatcgactttcgcgaagagggcagggacggtacggcggaagcggtctatatc
ggcacgggctcgctgctggacgaagaagggctcgctttcctgatctacgactggcgggcg
cccgtcgcctccatgtactacgatcacggccccggccccgccgcctatgtgacgccgggc
ggtgagatccggggagagctcgagcgcaaacggcagtatatcatccgggacgggcagctc
cgggccgtcttcgatacgggcctcacgatcggcgatgagctgctgcagcatgtgctgggc
ggcgcttccgactcgcggatgaagagcatcgtcgccacgatccagcgggagcagaaccgc
atcatccgcagcgaacaaagccgtctgctcctcgtggaaggagcggccggcagcggcaaa
acgtcggcggccctgcagcggatcgcctacctgctctaccggtaccgcgaatcgctgcgg
gccgaccagattgtgcttttctccccgaacgggatgttctccgcgtacgtgtcgtcggtg
ctgcccgagctcggggaagacaacatgcagcagacgaccttccaggaatacctggactac
cggcttgcggaggacttccgtgtggaagacccgctcgattccctggagtacgtctacggt
gagtccgaggggaagacggaagaactgcggttatccggaattgccgtgaagtcgcaagcc
tccttcctggaggcccttcagcagtatacggacttcctcggccgcgaggggggcatgaag
tggcggccgctgacattccgcgataccgtgatcgtgagcggggaggagatcgatgcgcgg
ttcagggcgctggacccgtgccagtcgattgcgggccggcttgagcagatcgcgaaggag
cttgtccggtcggcgcaggcctacatgcgcagccagctttatgcggactgggtggaggaa
gagatgcagacgctggatgcggaagcctacttgaaggcgtacagccggctgcagcagcgc
aaacggttctcggaggagacgttcgatgattttgaccgggaatatgaagagcttgcgaag
gctctgctgcaggaatatgtcacgccgctcaaaaggtggatccgcaggctgaagttcctc
gatatacaggggatgtacatggctctgcatgccgatccgctcctccgccgtgcccatctg
gatccgctcgccgggaatccggcggaggttgacgggtggtgcgcttatacggtccgacgg
ctggagaaaggggagctgccctatgaggatgcggccccgtacctgatcttcaaggaatcg
ctggagggcttccgtatgaacttgtcggtccgtcatgtgttcgtggatgaggcgcaggat
tacacgccgctgcagtgggcctatctgcgccgcctgttcccgcgcagccggtggacggtg
ctcggtgatccgcttcaggggatcggagcccacctcctgggcgtgcgggagatgaatcac
cccgctgtgctggcggcccctgccgaaacggagcgcatccggcttacccggacctaccgt
tcgacccggccgatcgtggagttcacccggacgctgcttccgggcgcggagatcgagccc
ttcgaccgggaagggccgaagccaaccttgacggtgaccggcagggagagcctcgccgaa
gagatccggcggagaacggagaaggtccgggaggccggacaccggacgatcgccatcctg
tgcaagaatgagcgggagagcctcgaggcttacgaacggctccgcgacgtcatggaagtg
aagcggattggtcagcacgggggttcctttgagcccggcgtgctggtgcttcccgcctac
ttggcgaagggtgtggaattcgatgccgtgctgatgtatgacgtatcgcaggagcggtat
ggcggggaacgggagcgcaagctcctctatacggcctgcacgcgggcgatgcatgagctt
cacttgttcagctgcggggagccgagccagctgctgcaggaggccccttccgagacctat
agggtacgaaacccccttgacaaccgccatcaataa
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